Gene : Eucgr.C00121 E. grandis v2.0
Defline:  (1 of 1) PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Genomic Order:  62
Name:  ? Eucgr.C00121 Secondary Identifier:  ? PAC:32036570
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00121 0.5kb upstream 0.5kb upstream 6007 true Chr03: 782684-788690 Eucalyptus grandis
Eucgr.C00121 0.5kb upstream 0.5kb upstream 500 false Chr03: 788191-788690 Eucalyptus grandis
Eucgr.C00121 0.5kb downstream 0.5kb downstream 6007 true Chr03: 782184-788190 Eucalyptus grandis
Eucgr.C00121 0.5kb downstream 0.5kb downstream 500 false Chr03: 782184-782683 Eucalyptus grandis
Eucgr.C00121 1.0kb upstream 1.0kb upstream 6507 true Chr03: 782684-789190 Eucalyptus grandis
Eucgr.C00121 1.0kb upstream 1.0kb upstream 1000 false Chr03: 788191-789190 Eucalyptus grandis
Eucgr.C00121 1.0kb downstream 1.0kb downstream 6507 true Chr03: 781684-788190 Eucalyptus grandis
Eucgr.C00121 1.0kb downstream 1.0kb downstream 1000 false Chr03: 781684-782683 Eucalyptus grandis
Eucgr.C00121 2.0kb upstream 2.0kb upstream 7507 true Chr03: 782684-790190 Eucalyptus grandis
Eucgr.C00121 2.0kb upstream 2.0kb upstream 2000 false Chr03: 788191-790190 Eucalyptus grandis
Eucgr.C00121 2.0kb downstream 2.0kb downstream 7507 true Chr03: 780684-788190 Eucalyptus grandis
Eucgr.C00121 2.0kb downstream 2.0kb downstream 2000 false Chr03: 780684-782683 Eucalyptus grandis
Eucgr.C00121 5.0kb upstream 5.0kb upstream 10507 true Chr03: 782684-793190 Eucalyptus grandis
Eucgr.C00121 5.0kb upstream 5.0kb upstream 5000 false Chr03: 788191-793190 Eucalyptus grandis
Eucgr.C00121 5.0kb downstream 5.0kb downstream 10507 true Chr03: 777684-788190 Eucalyptus grandis
Eucgr.C00121 5.0kb downstream 5.0kb downstream 5000 false Chr03: 777684-782683 Eucalyptus grandis
Eucgr.C00121 10.0kb upstream 10.0kb upstream 15507 true Chr03: 782684-798190 Eucalyptus grandis
Eucgr.C00121 10.0kb upstream 10.0kb upstream 10000 false Chr03: 788191-798190 Eucalyptus grandis
Eucgr.C00121 10.0kb downstream 10.0kb downstream 15507 true Chr03: 772684-788190 Eucalyptus grandis
Eucgr.C00121 10.0kb downstream 10.0kb downstream 10000 false Chr03: 772684-782683 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.3982 0.0 54.1716    
cufflinks 13.152 0.0 29.1167    
cufflinks 30.1025 0.0 67.348 High  
cufflinks 32.2679 0.0 72.531    
cufflinks 6.66978 0.0 15.1363   Low
cufflinks 14.4653 0.0 32.0337    

0 Strain