Gene : Eucgr.C00095 E. grandis v2.0
Defline:  (1 of 1) PF00122//PF00690//PF12515//PF13246 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // Ca2+-ATPase N terminal autoinhibitory domain (CaATP_NAI) // Cation transport ATPase (P-type) (Cation_ATPase) Genomic Order:  38
Name:  ? Eucgr.C00095 Secondary Identifier:  ? PAC:32038360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00095 0.5kb upstream 0.5kb upstream 10488 true Chr03: 589315-599802 Eucalyptus grandis
Eucgr.C00095 0.5kb upstream 0.5kb upstream 500 false Chr03: 599303-599802 Eucalyptus grandis
Eucgr.C00095 0.5kb downstream 0.5kb downstream 10488 true Chr03: 588815-599302 Eucalyptus grandis
Eucgr.C00095 0.5kb downstream 0.5kb downstream 500 false Chr03: 588815-589314 Eucalyptus grandis
Eucgr.C00095 1.0kb upstream 1.0kb upstream 10988 true Chr03: 589315-600302 Eucalyptus grandis
Eucgr.C00095 1.0kb upstream 1.0kb upstream 1000 false Chr03: 599303-600302 Eucalyptus grandis
Eucgr.C00095 1.0kb downstream 1.0kb downstream 10988 true Chr03: 588315-599302 Eucalyptus grandis
Eucgr.C00095 1.0kb downstream 1.0kb downstream 1000 false Chr03: 588315-589314 Eucalyptus grandis
Eucgr.C00095 2.0kb upstream 2.0kb upstream 11988 true Chr03: 589315-601302 Eucalyptus grandis
Eucgr.C00095 2.0kb upstream 2.0kb upstream 2000 false Chr03: 599303-601302 Eucalyptus grandis
Eucgr.C00095 2.0kb downstream 2.0kb downstream 11988 true Chr03: 587315-599302 Eucalyptus grandis
Eucgr.C00095 2.0kb downstream 2.0kb downstream 2000 false Chr03: 587315-589314 Eucalyptus grandis
Eucgr.C00095 5.0kb upstream 5.0kb upstream 14988 true Chr03: 589315-604302 Eucalyptus grandis
Eucgr.C00095 5.0kb upstream 5.0kb upstream 5000 false Chr03: 599303-604302 Eucalyptus grandis
Eucgr.C00095 5.0kb downstream 5.0kb downstream 14988 true Chr03: 584315-599302 Eucalyptus grandis
Eucgr.C00095 5.0kb downstream 5.0kb downstream 5000 false Chr03: 584315-589314 Eucalyptus grandis
Eucgr.C00095 10.0kb upstream 10.0kb upstream 19988 true Chr03: 589315-609302 Eucalyptus grandis
Eucgr.C00095 10.0kb upstream 10.0kb upstream 10000 false Chr03: 599303-609302 Eucalyptus grandis
Eucgr.C00095 10.0kb downstream 10.0kb downstream 19988 true Chr03: 579315-599302 Eucalyptus grandis
Eucgr.C00095 10.0kb downstream 10.0kb downstream 10000 false Chr03: 579315-589314 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074792 5270 Rosid View MSA
123753188 5271 Pentapetalae View MSA
122795849 5272 Eudicot View MSA
122049499 5273 Angiosperm View MSA
121351621 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4399 0.0 38.727   Low
cufflinks 103.026 0.0 243.773 High  
cufflinks 18.4318 0.0 40.8504   Low
cufflinks 124.505 0.0 301.101 High High
cufflinks 54.8077 0.0 123.642 High  
cufflinks 42.2036 0.0 93.9996 High  

0 Strain