Gene : Eucgr.C00103 E. grandis v2.0
Genomic Order:  45 Name:  ? Eucgr.C00103
Secondary Identifier:  ? PAC:32037880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00103 0.5kb upstream 0.5kb upstream 2123 true Chr03: 698077-700199 Eucalyptus grandis
Eucgr.C00103 0.5kb upstream 0.5kb upstream 500 false Chr03: 699700-700199 Eucalyptus grandis
Eucgr.C00103 0.5kb downstream 0.5kb downstream 2123 true Chr03: 697577-699699 Eucalyptus grandis
Eucgr.C00103 0.5kb downstream 0.5kb downstream 500 false Chr03: 697577-698076 Eucalyptus grandis
Eucgr.C00103 1.0kb upstream 1.0kb upstream 2623 true Chr03: 698077-700699 Eucalyptus grandis
Eucgr.C00103 1.0kb upstream 1.0kb upstream 1000 false Chr03: 699700-700699 Eucalyptus grandis
Eucgr.C00103 1.0kb downstream 1.0kb downstream 2623 true Chr03: 697077-699699 Eucalyptus grandis
Eucgr.C00103 1.0kb downstream 1.0kb downstream 1000 false Chr03: 697077-698076 Eucalyptus grandis
Eucgr.C00103 2.0kb upstream 2.0kb upstream 3623 true Chr03: 698077-701699 Eucalyptus grandis
Eucgr.C00103 2.0kb upstream 2.0kb upstream 2000 false Chr03: 699700-701699 Eucalyptus grandis
Eucgr.C00103 2.0kb downstream 2.0kb downstream 3623 true Chr03: 696077-699699 Eucalyptus grandis
Eucgr.C00103 2.0kb downstream 2.0kb downstream 2000 false Chr03: 696077-698076 Eucalyptus grandis
Eucgr.C00103 5.0kb upstream 5.0kb upstream 6623 true Chr03: 698077-704699 Eucalyptus grandis
Eucgr.C00103 5.0kb upstream 5.0kb upstream 5000 false Chr03: 699700-704699 Eucalyptus grandis
Eucgr.C00103 5.0kb downstream 5.0kb downstream 6623 true Chr03: 693077-699699 Eucalyptus grandis
Eucgr.C00103 5.0kb downstream 5.0kb downstream 5000 false Chr03: 693077-698076 Eucalyptus grandis
Eucgr.C00103 10.0kb upstream 10.0kb upstream 11623 true Chr03: 698077-709699 Eucalyptus grandis
Eucgr.C00103 10.0kb upstream 10.0kb upstream 10000 false Chr03: 699700-709699 Eucalyptus grandis
Eucgr.C00103 10.0kb downstream 10.0kb downstream 11623 true Chr03: 688077-699699 Eucalyptus grandis
Eucgr.C00103 10.0kb downstream 10.0kb downstream 10000 false Chr03: 688077-698076 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026252 5273 Angiosperm View MSA
124044420 5270 Rosid Singleton cluster - no MSA
123745537 5271 Pentapetalae View MSA
122796555 5272 Eudicot View MSA
121296245 5274 Embryophyte View MSA
123334442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75728 0.0 5.04954    
cufflinks 2.47977 0.0 6.81915    
cufflinks 0.615151 0.0 1.99042   Low
cufflinks 2.65176 0.0 7.23632    
cufflinks 1.75616 0.0 5.02103    
cufflinks 0.744172 0.0 2.39331 Low Low

0 Strain