Gene : Eucgr.C00068 E. grandis v2.0
Defline:  (1 of 1) KOG3068 - mRNA splicing factor Genomic Order:  16
Name:  ? Eucgr.C00068 Secondary Identifier:  ? PAC:32039891
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00068 0.5kb upstream 0.5kb upstream 2313 true Chr03: 274425-276737 Eucalyptus grandis
Eucgr.C00068 0.5kb upstream 0.5kb upstream 500 false Chr03: 274425-274924 Eucalyptus grandis
Eucgr.C00068 0.5kb downstream 0.5kb downstream 2313 true Chr03: 274925-277237 Eucalyptus grandis
Eucgr.C00068 0.5kb downstream 0.5kb downstream 500 false Chr03: 276738-277237 Eucalyptus grandis
Eucgr.C00068 1.0kb upstream 1.0kb upstream 2813 true Chr03: 273925-276737 Eucalyptus grandis
Eucgr.C00068 1.0kb upstream 1.0kb upstream 1000 false Chr03: 273925-274924 Eucalyptus grandis
Eucgr.C00068 1.0kb downstream 1.0kb downstream 2813 true Chr03: 274925-277737 Eucalyptus grandis
Eucgr.C00068 1.0kb downstream 1.0kb downstream 1000 false Chr03: 276738-277737 Eucalyptus grandis
Eucgr.C00068 2.0kb upstream 2.0kb upstream 3813 true Chr03: 272925-276737 Eucalyptus grandis
Eucgr.C00068 2.0kb upstream 2.0kb upstream 2000 false Chr03: 272925-274924 Eucalyptus grandis
Eucgr.C00068 2.0kb downstream 2.0kb downstream 3813 true Chr03: 274925-278737 Eucalyptus grandis
Eucgr.C00068 2.0kb downstream 2.0kb downstream 2000 false Chr03: 276738-278737 Eucalyptus grandis
Eucgr.C00068 5.0kb upstream 5.0kb upstream 6813 true Chr03: 269925-276737 Eucalyptus grandis
Eucgr.C00068 5.0kb upstream 5.0kb upstream 5000 false Chr03: 269925-274924 Eucalyptus grandis
Eucgr.C00068 5.0kb downstream 5.0kb downstream 6813 true Chr03: 274925-281737 Eucalyptus grandis
Eucgr.C00068 5.0kb downstream 5.0kb downstream 5000 false Chr03: 276738-281737 Eucalyptus grandis
Eucgr.C00068 10.0kb upstream 10.0kb upstream 11813 true Chr03: 264925-276737 Eucalyptus grandis
Eucgr.C00068 10.0kb upstream 10.0kb upstream 10000 false Chr03: 264925-274924 Eucalyptus grandis
Eucgr.C00068 10.0kb downstream 10.0kb downstream 11813 true Chr03: 274925-286737 Eucalyptus grandis
Eucgr.C00068 10.0kb downstream 10.0kb downstream 10000 false Chr03: 276738-286737 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7747 0.0 54.861   High
cufflinks 11.7806 0.0 26.8777   Low
cufflinks 18.0091 0.0 40.1768    
cufflinks 22.8051 0.0 50.5513    
cufflinks 19.4244 0.0 43.2589    
cufflinks 19.6785 0.0 43.7211    

0 Strain