Gene : Eucgr.C00062 E. grandis v2.0
Defline:  (1 of 1) PTHR12225 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN Genomic Order:  10
Name:  ? Eucgr.C00062 Secondary Identifier:  ? PAC:32038403
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00062 0.5kb upstream 0.5kb upstream 7277 true Chr03: 228990-236266 Eucalyptus grandis
Eucgr.C00062 0.5kb upstream 0.5kb upstream 500 false Chr03: 235767-236266 Eucalyptus grandis
Eucgr.C00062 0.5kb downstream 0.5kb downstream 7277 true Chr03: 228490-235766 Eucalyptus grandis
Eucgr.C00062 0.5kb downstream 0.5kb downstream 500 false Chr03: 228490-228989 Eucalyptus grandis
Eucgr.C00062 1.0kb upstream 1.0kb upstream 7777 true Chr03: 228990-236766 Eucalyptus grandis
Eucgr.C00062 1.0kb upstream 1.0kb upstream 1000 false Chr03: 235767-236766 Eucalyptus grandis
Eucgr.C00062 1.0kb downstream 1.0kb downstream 7777 true Chr03: 227990-235766 Eucalyptus grandis
Eucgr.C00062 1.0kb downstream 1.0kb downstream 1000 false Chr03: 227990-228989 Eucalyptus grandis
Eucgr.C00062 2.0kb upstream 2.0kb upstream 8777 true Chr03: 228990-237766 Eucalyptus grandis
Eucgr.C00062 2.0kb upstream 2.0kb upstream 2000 false Chr03: 235767-237766 Eucalyptus grandis
Eucgr.C00062 2.0kb downstream 2.0kb downstream 8777 true Chr03: 226990-235766 Eucalyptus grandis
Eucgr.C00062 2.0kb downstream 2.0kb downstream 2000 false Chr03: 226990-228989 Eucalyptus grandis
Eucgr.C00062 5.0kb upstream 5.0kb upstream 11777 true Chr03: 228990-240766 Eucalyptus grandis
Eucgr.C00062 5.0kb upstream 5.0kb upstream 5000 false Chr03: 235767-240766 Eucalyptus grandis
Eucgr.C00062 5.0kb downstream 5.0kb downstream 11777 true Chr03: 223990-235766 Eucalyptus grandis
Eucgr.C00062 5.0kb downstream 5.0kb downstream 5000 false Chr03: 223990-228989 Eucalyptus grandis
Eucgr.C00062 10.0kb upstream 10.0kb upstream 16777 true Chr03: 228990-245766 Eucalyptus grandis
Eucgr.C00062 10.0kb upstream 10.0kb upstream 10000 false Chr03: 235767-245766 Eucalyptus grandis
Eucgr.C00062 10.0kb downstream 10.0kb downstream 16777 true Chr03: 218990-235766 Eucalyptus grandis
Eucgr.C00062 10.0kb downstream 10.0kb downstream 10000 false Chr03: 218990-228989 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041235 5273 Angiosperm View MSA
124066938 5270 Rosid View MSA
123746054 5271 Pentapetalae View MSA
122790240 5272 Eudicot View MSA
121344087 5274 Embryophyte View MSA
123425149 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.2274 0.0 70.5674 High  
cufflinks 21.3471 0.0 56.4784   Low
cufflinks 34.8511 0.0 99.2666 High High
cufflinks 24.0194 0.0 62.239    
cufflinks 25.0964 0.0 62.5916    
cufflinks 29.8931 0.0 75.47    

0 Strain