Gene : Eucgr.C00073 E. grandis v2.0
Defline:  (1 of 1) PTHR32285:SF8 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 5 Genomic Order:  21
Name:  ? Eucgr.C00073 Secondary Identifier:  ? PAC:32035961
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00073 0.5kb upstream 0.5kb upstream 4961 true Chr03: 331714-336674 Eucalyptus grandis
Eucgr.C00073 0.5kb upstream 0.5kb upstream 500 false Chr03: 331714-332213 Eucalyptus grandis
Eucgr.C00073 0.5kb downstream 0.5kb downstream 4961 true Chr03: 332214-337174 Eucalyptus grandis
Eucgr.C00073 0.5kb downstream 0.5kb downstream 500 false Chr03: 336675-337174 Eucalyptus grandis
Eucgr.C00073 1.0kb upstream 1.0kb upstream 5461 true Chr03: 331214-336674 Eucalyptus grandis
Eucgr.C00073 1.0kb upstream 1.0kb upstream 1000 false Chr03: 331214-332213 Eucalyptus grandis
Eucgr.C00073 1.0kb downstream 1.0kb downstream 5461 true Chr03: 332214-337674 Eucalyptus grandis
Eucgr.C00073 1.0kb downstream 1.0kb downstream 1000 false Chr03: 336675-337674 Eucalyptus grandis
Eucgr.C00073 2.0kb upstream 2.0kb upstream 6461 true Chr03: 330214-336674 Eucalyptus grandis
Eucgr.C00073 2.0kb upstream 2.0kb upstream 2000 false Chr03: 330214-332213 Eucalyptus grandis
Eucgr.C00073 2.0kb downstream 2.0kb downstream 6461 true Chr03: 332214-338674 Eucalyptus grandis
Eucgr.C00073 2.0kb downstream 2.0kb downstream 2000 false Chr03: 336675-338674 Eucalyptus grandis
Eucgr.C00073 5.0kb upstream 5.0kb upstream 9461 true Chr03: 327214-336674 Eucalyptus grandis
Eucgr.C00073 5.0kb upstream 5.0kb upstream 5000 false Chr03: 327214-332213 Eucalyptus grandis
Eucgr.C00073 5.0kb downstream 5.0kb downstream 9461 true Chr03: 332214-341674 Eucalyptus grandis
Eucgr.C00073 5.0kb downstream 5.0kb downstream 5000 false Chr03: 336675-341674 Eucalyptus grandis
Eucgr.C00073 10.0kb upstream 10.0kb upstream 14461 true Chr03: 322214-336674 Eucalyptus grandis
Eucgr.C00073 10.0kb upstream 10.0kb upstream 10000 false Chr03: 322214-332213 Eucalyptus grandis
Eucgr.C00073 10.0kb downstream 10.0kb downstream 14461 true Chr03: 332214-346674 Eucalyptus grandis
Eucgr.C00073 10.0kb downstream 10.0kb downstream 10000 false Chr03: 336675-346674 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064796 5270 Rosid View MSA
123739697 5271 Pentapetalae View MSA
122792275 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97334 0.0 22.9188    
cufflinks 12.0049 0.0 27.2197    
cufflinks 9.16408 0.0 21.1703    
cufflinks 18.1858 0.0 40.4608   High
cufflinks 16.2695 0.0 36.3586    
cufflinks 5.01804 0.0 12.2626   Low

0 Strain