Gene : Eucgr.C00061 E. grandis v2.0
Defline:  (1 of 1) PTHR31355:SF5 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  9
Name:  ? Eucgr.C00061 Secondary Identifier:  ? PAC:32038843
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00061 0.5kb upstream 0.5kb upstream 9318 true Chr03: 217682-226999 Eucalyptus grandis
Eucgr.C00061 0.5kb upstream 0.5kb upstream 500 false Chr03: 226500-226999 Eucalyptus grandis
Eucgr.C00061 0.5kb downstream 0.5kb downstream 9318 true Chr03: 217182-226499 Eucalyptus grandis
Eucgr.C00061 0.5kb downstream 0.5kb downstream 500 false Chr03: 217182-217681 Eucalyptus grandis
Eucgr.C00061 1.0kb upstream 1.0kb upstream 9818 true Chr03: 217682-227499 Eucalyptus grandis
Eucgr.C00061 1.0kb upstream 1.0kb upstream 1000 false Chr03: 226500-227499 Eucalyptus grandis
Eucgr.C00061 1.0kb downstream 1.0kb downstream 9818 true Chr03: 216682-226499 Eucalyptus grandis
Eucgr.C00061 1.0kb downstream 1.0kb downstream 1000 false Chr03: 216682-217681 Eucalyptus grandis
Eucgr.C00061 2.0kb upstream 2.0kb upstream 10818 true Chr03: 217682-228499 Eucalyptus grandis
Eucgr.C00061 2.0kb upstream 2.0kb upstream 2000 false Chr03: 226500-228499 Eucalyptus grandis
Eucgr.C00061 2.0kb downstream 2.0kb downstream 10818 true Chr03: 215682-226499 Eucalyptus grandis
Eucgr.C00061 2.0kb downstream 2.0kb downstream 2000 false Chr03: 215682-217681 Eucalyptus grandis
Eucgr.C00061 5.0kb upstream 5.0kb upstream 13818 true Chr03: 217682-231499 Eucalyptus grandis
Eucgr.C00061 5.0kb upstream 5.0kb upstream 5000 false Chr03: 226500-231499 Eucalyptus grandis
Eucgr.C00061 5.0kb downstream 5.0kb downstream 13818 true Chr03: 212682-226499 Eucalyptus grandis
Eucgr.C00061 5.0kb downstream 5.0kb downstream 5000 false Chr03: 212682-217681 Eucalyptus grandis
Eucgr.C00061 10.0kb upstream 10.0kb upstream 18818 true Chr03: 217682-236499 Eucalyptus grandis
Eucgr.C00061 10.0kb upstream 10.0kb upstream 10000 false Chr03: 226500-236499 Eucalyptus grandis
Eucgr.C00061 10.0kb downstream 10.0kb downstream 18818 true Chr03: 207682-226499 Eucalyptus grandis
Eucgr.C00061 10.0kb downstream 10.0kb downstream 10000 false Chr03: 207682-217681 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068750 5270 Rosid View MSA
123737726 5271 Pentapetalae View MSA
122786179 5272 Eudicot View MSA
122044340 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60528 0.0 8.54605   High
cufflinks 1.13594 0.0 3.00159    
cufflinks 2.29848 0.0 5.66545    
cufflinks 0.453605 0.0 1.31159   Low
cufflinks 1.9791 0.0 4.957    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain