Gene : Eucgr.L01272 E. grandis v2.0
Defline:  (1 of 2) PTHR24098:SF9 - ACYL-COA N-ACYLTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  737
Name:  ? Eucgr.L01272 Secondary Identifier:  ? PAC:32061419
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01272 0.5kb upstream 0.5kb upstream 7709 true Chr02: 12618389-12626097 Eucalyptus grandis
Eucgr.L01272 0.5kb upstream 0.5kb upstream 500 false Chr02: 12618389-12618888 Eucalyptus grandis
Eucgr.L01272 0.5kb downstream 0.5kb downstream 7709 true Chr02: 12618889-12626597 Eucalyptus grandis
Eucgr.L01272 0.5kb downstream 0.5kb downstream 500 false Chr02: 12626098-12626597 Eucalyptus grandis
Eucgr.L01272 1.0kb upstream 1.0kb upstream 8209 true Chr02: 12617889-12626097 Eucalyptus grandis
Eucgr.L01272 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12617889-12618888 Eucalyptus grandis
Eucgr.L01272 1.0kb downstream 1.0kb downstream 8209 true Chr02: 12618889-12627097 Eucalyptus grandis
Eucgr.L01272 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12626098-12627097 Eucalyptus grandis
Eucgr.L01272 2.0kb upstream 2.0kb upstream 9209 true Chr02: 12616889-12626097 Eucalyptus grandis
Eucgr.L01272 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12616889-12618888 Eucalyptus grandis
Eucgr.L01272 2.0kb downstream 2.0kb downstream 9209 true Chr02: 12618889-12628097 Eucalyptus grandis
Eucgr.L01272 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12626098-12628097 Eucalyptus grandis
Eucgr.L01272 5.0kb upstream 5.0kb upstream 12209 true Chr02: 12613889-12626097 Eucalyptus grandis
Eucgr.L01272 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12613889-12618888 Eucalyptus grandis
Eucgr.L01272 5.0kb downstream 5.0kb downstream 12209 true Chr02: 12618889-12631097 Eucalyptus grandis
Eucgr.L01272 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12626098-12631097 Eucalyptus grandis
Eucgr.L01272 10.0kb upstream 10.0kb upstream 17209 true Chr02: 12608889-12626097 Eucalyptus grandis
Eucgr.L01272 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12608889-12618888 Eucalyptus grandis
Eucgr.L01272 10.0kb downstream 10.0kb downstream 17209 true Chr02: 12618889-12636097 Eucalyptus grandis
Eucgr.L01272 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12626098-12636097 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073336 5270 Rosid View MSA
123742253 5271 Pentapetalae View MSA
122793058 5272 Eudicot View MSA
122043128 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.7065 0.0 19.3028    
cufflinks 6.81886 0.0 15.1839    
cufflinks 7.61089 0.0 16.9    
cufflinks 7.27274 0.0 16.1485    
cufflinks 3.24202 0.0 7.52711   Low
cufflinks 10.584 0.0 23.4241   High

0 Strain