Gene : Eucgr.L00240 E. grandis v2.0
Defline:  (1 of 22) 2.4.1.123 - Inositol 3-alpha-galactosyltransferase / UDP-alpha-D-galactose:myo-inositol 3-alpha-D-galactosyltransferase Genomic Order:  1411
Name:  ? Eucgr.L00240 Secondary Identifier:  ? PAC:32058264
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5337 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00240 0.5kb upstream 0.5kb upstream 1681 true Chr02: 31525371-31527051 Eucalyptus grandis
Eucgr.L00240 0.5kb upstream 0.5kb upstream 500 false Chr02: 31525371-31525870 Eucalyptus grandis
Eucgr.L00240 0.5kb downstream 0.5kb downstream 1681 true Chr02: 31525871-31527551 Eucalyptus grandis
Eucgr.L00240 0.5kb downstream 0.5kb downstream 500 false Chr02: 31527052-31527551 Eucalyptus grandis
Eucgr.L00240 1.0kb upstream 1.0kb upstream 2181 true Chr02: 31524871-31527051 Eucalyptus grandis
Eucgr.L00240 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31524871-31525870 Eucalyptus grandis
Eucgr.L00240 1.0kb downstream 1.0kb downstream 2181 true Chr02: 31525871-31528051 Eucalyptus grandis
Eucgr.L00240 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31527052-31528051 Eucalyptus grandis
Eucgr.L00240 2.0kb upstream 2.0kb upstream 3181 true Chr02: 31523871-31527051 Eucalyptus grandis
Eucgr.L00240 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31523871-31525870 Eucalyptus grandis
Eucgr.L00240 2.0kb downstream 2.0kb downstream 3181 true Chr02: 31525871-31529051 Eucalyptus grandis
Eucgr.L00240 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31527052-31529051 Eucalyptus grandis
Eucgr.L00240 5.0kb upstream 5.0kb upstream 6181 true Chr02: 31520871-31527051 Eucalyptus grandis
Eucgr.L00240 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31520871-31525870 Eucalyptus grandis
Eucgr.L00240 5.0kb downstream 5.0kb downstream 6181 true Chr02: 31525871-31532051 Eucalyptus grandis
Eucgr.L00240 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31527052-31532051 Eucalyptus grandis
Eucgr.L00240 10.0kb upstream 10.0kb upstream 11181 true Chr02: 31515871-31527051 Eucalyptus grandis
Eucgr.L00240 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31515871-31525870 Eucalyptus grandis
Eucgr.L00240 10.0kb downstream 10.0kb downstream 11181 true Chr02: 31525871-31537051 Eucalyptus grandis
Eucgr.L00240 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31527052-31537051 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.260909 0.0 0.965242 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.25843 0.0 3.81502    
cufflinks 0.798337 0.0 2.5608    
cufflinks 1.52147 0.0 4.48839    
cufflinks 1.2941 0.0 3.88268    

0 Strain