Gene : Eucgr.L00262 E. grandis v2.0
Defline:  (1 of 2) PF04795 - PAPA-1-like conserved region (PAPA-1) Genomic Order:  1393
Name:  ? Eucgr.L00262 Secondary Identifier:  ? PAC:32059576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00262 0.5kb upstream 0.5kb upstream 3276 true Chr02: 31261047-31264322 Eucalyptus grandis
Eucgr.L00262 0.5kb upstream 0.5kb upstream 500 false Chr02: 31263823-31264322 Eucalyptus grandis
Eucgr.L00262 0.5kb downstream 0.5kb downstream 3276 true Chr02: 31260547-31263822 Eucalyptus grandis
Eucgr.L00262 0.5kb downstream 0.5kb downstream 500 false Chr02: 31260547-31261046 Eucalyptus grandis
Eucgr.L00262 1.0kb upstream 1.0kb upstream 3776 true Chr02: 31261047-31264822 Eucalyptus grandis
Eucgr.L00262 1.0kb upstream 1.0kb upstream 1000 false Chr02: 31263823-31264822 Eucalyptus grandis
Eucgr.L00262 1.0kb downstream 1.0kb downstream 3776 true Chr02: 31260047-31263822 Eucalyptus grandis
Eucgr.L00262 1.0kb downstream 1.0kb downstream 1000 false Chr02: 31260047-31261046 Eucalyptus grandis
Eucgr.L00262 2.0kb upstream 2.0kb upstream 4776 true Chr02: 31261047-31265822 Eucalyptus grandis
Eucgr.L00262 2.0kb upstream 2.0kb upstream 2000 false Chr02: 31263823-31265822 Eucalyptus grandis
Eucgr.L00262 2.0kb downstream 2.0kb downstream 4776 true Chr02: 31259047-31263822 Eucalyptus grandis
Eucgr.L00262 2.0kb downstream 2.0kb downstream 2000 false Chr02: 31259047-31261046 Eucalyptus grandis
Eucgr.L00262 5.0kb upstream 5.0kb upstream 7776 true Chr02: 31261047-31268822 Eucalyptus grandis
Eucgr.L00262 5.0kb upstream 5.0kb upstream 5000 false Chr02: 31263823-31268822 Eucalyptus grandis
Eucgr.L00262 5.0kb downstream 5.0kb downstream 7776 true Chr02: 31256047-31263822 Eucalyptus grandis
Eucgr.L00262 5.0kb downstream 5.0kb downstream 5000 false Chr02: 31256047-31261046 Eucalyptus grandis
Eucgr.L00262 10.0kb upstream 10.0kb upstream 12776 true Chr02: 31261047-31273822 Eucalyptus grandis
Eucgr.L00262 10.0kb upstream 10.0kb upstream 10000 false Chr02: 31263823-31273822 Eucalyptus grandis
Eucgr.L00262 10.0kb downstream 10.0kb downstream 12776 true Chr02: 31251047-31263822 Eucalyptus grandis
Eucgr.L00262 10.0kb downstream 10.0kb downstream 10000 false Chr02: 31251047-31261046 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
124071292 5270 Rosid View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08297 0.0 9.8103    
cufflinks 2.03845 0.0 5.48899   Low
cufflinks 5.49287 0.0 15.8131   High
cufflinks 2.46177 0.0 6.30423    
cufflinks 2.96533 0.0 7.4332    
cufflinks 4.66213 0.0 11.1017    

0 Strain