Gene : Eucgr.B04014 E. grandis v2.0
Defline:  (1 of 3) PTHR13073:SF0 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 1 Genomic Order:  3266
Name:  ? Eucgr.B04014 Secondary Identifier:  ? PAC:32061291
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B04014 0.5kb upstream 0.5kb upstream 1818 true Chr02: 59261947-59263764 Eucalyptus grandis
Eucgr.B04014 0.5kb upstream 0.5kb upstream 500 false Chr02: 59263265-59263764 Eucalyptus grandis
Eucgr.B04014 0.5kb downstream 0.5kb downstream 1818 true Chr02: 59261447-59263264 Eucalyptus grandis
Eucgr.B04014 0.5kb downstream 0.5kb downstream 500 false Chr02: 59261447-59261946 Eucalyptus grandis
Eucgr.B04014 1.0kb upstream 1.0kb upstream 2318 true Chr02: 59261947-59264264 Eucalyptus grandis
Eucgr.B04014 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59263265-59264264 Eucalyptus grandis
Eucgr.B04014 1.0kb downstream 1.0kb downstream 2318 true Chr02: 59260947-59263264 Eucalyptus grandis
Eucgr.B04014 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59260947-59261946 Eucalyptus grandis
Eucgr.B04014 2.0kb upstream 2.0kb upstream 3318 true Chr02: 59261947-59265264 Eucalyptus grandis
Eucgr.B04014 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59263265-59265264 Eucalyptus grandis
Eucgr.B04014 2.0kb downstream 2.0kb downstream 3318 true Chr02: 59259947-59263264 Eucalyptus grandis
Eucgr.B04014 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59259947-59261946 Eucalyptus grandis
Eucgr.B04014 5.0kb upstream 5.0kb upstream 6318 true Chr02: 59261947-59268264 Eucalyptus grandis
Eucgr.B04014 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59263265-59268264 Eucalyptus grandis
Eucgr.B04014 5.0kb downstream 5.0kb downstream 6318 true Chr02: 59256947-59263264 Eucalyptus grandis
Eucgr.B04014 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59256947-59261946 Eucalyptus grandis
Eucgr.B04014 10.0kb upstream 10.0kb upstream 11318 true Chr02: 59261947-59273264 Eucalyptus grandis
Eucgr.B04014 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59263265-59273264 Eucalyptus grandis
Eucgr.B04014 10.0kb downstream 10.0kb downstream 11318 true Chr02: 59251947-59263264 Eucalyptus grandis
Eucgr.B04014 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59251947-59261946 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067786 5270 Rosid View MSA
123736631 5271 Pentapetalae View MSA
122790924 5272 Eudicot View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2619 0.0 64.6027    
cufflinks 10.3828 0.0 34.9958    
cufflinks 11.8919 0.0 48.4953    
cufflinks 9.35592 0.0 29.3094   Low
cufflinks 12.1787 0.0 34.9776    
cufflinks 23.3925 0.0 84.3701   High

0 Strain