Gene : Eucgr.B04005 E. grandis v2.0
Defline:  (1 of 1) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  3258
Name:  ? Eucgr.B04005 Secondary Identifier:  ? PAC:32058715
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B04005 0.5kb upstream 0.5kb upstream 4947 true Chr02: 59195810-59200756 Eucalyptus grandis
Eucgr.B04005 0.5kb upstream 0.5kb upstream 500 false Chr02: 59195810-59196309 Eucalyptus grandis
Eucgr.B04005 0.5kb downstream 0.5kb downstream 4947 true Chr02: 59196310-59201256 Eucalyptus grandis
Eucgr.B04005 0.5kb downstream 0.5kb downstream 500 false Chr02: 59200757-59201256 Eucalyptus grandis
Eucgr.B04005 1.0kb upstream 1.0kb upstream 5447 true Chr02: 59195310-59200756 Eucalyptus grandis
Eucgr.B04005 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59195310-59196309 Eucalyptus grandis
Eucgr.B04005 1.0kb downstream 1.0kb downstream 5447 true Chr02: 59196310-59201756 Eucalyptus grandis
Eucgr.B04005 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59200757-59201756 Eucalyptus grandis
Eucgr.B04005 2.0kb upstream 2.0kb upstream 6447 true Chr02: 59194310-59200756 Eucalyptus grandis
Eucgr.B04005 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59194310-59196309 Eucalyptus grandis
Eucgr.B04005 2.0kb downstream 2.0kb downstream 6447 true Chr02: 59196310-59202756 Eucalyptus grandis
Eucgr.B04005 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59200757-59202756 Eucalyptus grandis
Eucgr.B04005 5.0kb upstream 5.0kb upstream 9447 true Chr02: 59191310-59200756 Eucalyptus grandis
Eucgr.B04005 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59191310-59196309 Eucalyptus grandis
Eucgr.B04005 5.0kb downstream 5.0kb downstream 9447 true Chr02: 59196310-59205756 Eucalyptus grandis
Eucgr.B04005 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59200757-59205756 Eucalyptus grandis
Eucgr.B04005 10.0kb upstream 10.0kb upstream 14447 true Chr02: 59186310-59200756 Eucalyptus grandis
Eucgr.B04005 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59186310-59196309 Eucalyptus grandis
Eucgr.B04005 10.0kb downstream 10.0kb downstream 14447 true Chr02: 59196310-59210756 Eucalyptus grandis
Eucgr.B04005 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59200757-59210756 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
124063344 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7181 0.0 52.4693    
cufflinks 49.8513 0.0 112.824 High High
cufflinks 24.8403 0.0 54.9726    
cufflinks 36.6436 0.0 81.8389    
cufflinks 22.7992 0.0 50.4266    
cufflinks 25.4838 0.0 56.4134    

0 Strain