Gene : Eucgr.B03991 E. grandis v2.0
Defline:  (1 of 3) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  3245
Name:  ? Eucgr.B03991 Secondary Identifier:  ? PAC:32062292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03991 0.5kb upstream 0.5kb upstream 1547 true Chr02: 59085473-59087019 Eucalyptus grandis
Eucgr.B03991 0.5kb upstream 0.5kb upstream 500 false Chr02: 59085473-59085972 Eucalyptus grandis
Eucgr.B03991 0.5kb downstream 0.5kb downstream 1547 true Chr02: 59085973-59087519 Eucalyptus grandis
Eucgr.B03991 0.5kb downstream 0.5kb downstream 500 false Chr02: 59087020-59087519 Eucalyptus grandis
Eucgr.B03991 1.0kb upstream 1.0kb upstream 2047 true Chr02: 59084973-59087019 Eucalyptus grandis
Eucgr.B03991 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59084973-59085972 Eucalyptus grandis
Eucgr.B03991 1.0kb downstream 1.0kb downstream 2047 true Chr02: 59085973-59088019 Eucalyptus grandis
Eucgr.B03991 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59087020-59088019 Eucalyptus grandis
Eucgr.B03991 2.0kb upstream 2.0kb upstream 3047 true Chr02: 59083973-59087019 Eucalyptus grandis
Eucgr.B03991 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59083973-59085972 Eucalyptus grandis
Eucgr.B03991 2.0kb downstream 2.0kb downstream 3047 true Chr02: 59085973-59089019 Eucalyptus grandis
Eucgr.B03991 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59087020-59089019 Eucalyptus grandis
Eucgr.B03991 5.0kb upstream 5.0kb upstream 6047 true Chr02: 59080973-59087019 Eucalyptus grandis
Eucgr.B03991 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59080973-59085972 Eucalyptus grandis
Eucgr.B03991 5.0kb downstream 5.0kb downstream 6047 true Chr02: 59085973-59092019 Eucalyptus grandis
Eucgr.B03991 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59087020-59092019 Eucalyptus grandis
Eucgr.B03991 10.0kb upstream 10.0kb upstream 11047 true Chr02: 59075973-59087019 Eucalyptus grandis
Eucgr.B03991 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59075973-59085972 Eucalyptus grandis
Eucgr.B03991 10.0kb downstream 10.0kb downstream 11047 true Chr02: 59085973-59097019 Eucalyptus grandis
Eucgr.B03991 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59087020-59097019 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.350858 0.0 1.31195 Low Low
cufflinks 9.12419 0.0 23.1661    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 56.3248 0.0 125.009 High  
cufflinks 19.1778 0.0 45.3407    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain