Gene : Eucgr.B03942 E. grandis v2.0
Defline:  (1 of 3) PTHR24096:SF236 - PROTEIN ACS-9 Genomic Order:  3198
Name:  ? Eucgr.B03942 Secondary Identifier:  ? PAC:32058939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03942 0.5kb upstream 0.5kb upstream 5348 true Chr02: 58567834-58573181 Eucalyptus grandis
Eucgr.B03942 0.5kb upstream 0.5kb upstream 500 false Chr02: 58567834-58568333 Eucalyptus grandis
Eucgr.B03942 0.5kb downstream 0.5kb downstream 5348 true Chr02: 58568334-58573681 Eucalyptus grandis
Eucgr.B03942 0.5kb downstream 0.5kb downstream 500 false Chr02: 58573182-58573681 Eucalyptus grandis
Eucgr.B03942 1.0kb upstream 1.0kb upstream 5848 true Chr02: 58567334-58573181 Eucalyptus grandis
Eucgr.B03942 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58567334-58568333 Eucalyptus grandis
Eucgr.B03942 1.0kb downstream 1.0kb downstream 5848 true Chr02: 58568334-58574181 Eucalyptus grandis
Eucgr.B03942 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58573182-58574181 Eucalyptus grandis
Eucgr.B03942 2.0kb upstream 2.0kb upstream 6848 true Chr02: 58566334-58573181 Eucalyptus grandis
Eucgr.B03942 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58566334-58568333 Eucalyptus grandis
Eucgr.B03942 2.0kb downstream 2.0kb downstream 6848 true Chr02: 58568334-58575181 Eucalyptus grandis
Eucgr.B03942 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58573182-58575181 Eucalyptus grandis
Eucgr.B03942 5.0kb upstream 5.0kb upstream 9848 true Chr02: 58563334-58573181 Eucalyptus grandis
Eucgr.B03942 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58563334-58568333 Eucalyptus grandis
Eucgr.B03942 5.0kb downstream 5.0kb downstream 9848 true Chr02: 58568334-58578181 Eucalyptus grandis
Eucgr.B03942 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58573182-58578181 Eucalyptus grandis
Eucgr.B03942 10.0kb upstream 10.0kb upstream 14848 true Chr02: 58558334-58573181 Eucalyptus grandis
Eucgr.B03942 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58558334-58568333 Eucalyptus grandis
Eucgr.B03942 10.0kb downstream 10.0kb downstream 14848 true Chr02: 58568334-58583181 Eucalyptus grandis
Eucgr.B03942 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58573182-58583181 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066794 5270 Rosid View MSA
123740977 5271 Pentapetalae View MSA
122792811 5272 Eudicot View MSA
122045114 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.0379 0.0 105.711 High High
cufflinks 8.60488 0.0 19.6503    
cufflinks 32.0621 0.0 71.1232 High  
cufflinks 7.96918 0.0 18.2974    
cufflinks 6.26935 0.0 14.6459   Low
cufflinks 32.6518 0.0 72.5141    

0 Strain