Gene : Eucgr.B03950 E. grandis v2.0
Defline:  (1 of 3) PTHR10788:SF14 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 10-RELATED Genomic Order:  3206
Name:  ? Eucgr.B03950 Secondary Identifier:  ? PAC:32059019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03950 0.5kb upstream 0.5kb upstream 6814 true Chr02: 58671856-58678669 Eucalyptus grandis
Eucgr.B03950 0.5kb upstream 0.5kb upstream 500 false Chr02: 58671856-58672355 Eucalyptus grandis
Eucgr.B03950 0.5kb downstream 0.5kb downstream 6814 true Chr02: 58672356-58679169 Eucalyptus grandis
Eucgr.B03950 0.5kb downstream 0.5kb downstream 500 false Chr02: 58678670-58679169 Eucalyptus grandis
Eucgr.B03950 1.0kb upstream 1.0kb upstream 7314 true Chr02: 58671356-58678669 Eucalyptus grandis
Eucgr.B03950 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58671356-58672355 Eucalyptus grandis
Eucgr.B03950 1.0kb downstream 1.0kb downstream 7314 true Chr02: 58672356-58679669 Eucalyptus grandis
Eucgr.B03950 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58678670-58679669 Eucalyptus grandis
Eucgr.B03950 2.0kb upstream 2.0kb upstream 8314 true Chr02: 58670356-58678669 Eucalyptus grandis
Eucgr.B03950 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58670356-58672355 Eucalyptus grandis
Eucgr.B03950 2.0kb downstream 2.0kb downstream 8314 true Chr02: 58672356-58680669 Eucalyptus grandis
Eucgr.B03950 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58678670-58680669 Eucalyptus grandis
Eucgr.B03950 5.0kb upstream 5.0kb upstream 11314 true Chr02: 58667356-58678669 Eucalyptus grandis
Eucgr.B03950 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58667356-58672355 Eucalyptus grandis
Eucgr.B03950 5.0kb downstream 5.0kb downstream 11314 true Chr02: 58672356-58683669 Eucalyptus grandis
Eucgr.B03950 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58678670-58683669 Eucalyptus grandis
Eucgr.B03950 10.0kb upstream 10.0kb upstream 16314 true Chr02: 58662356-58678669 Eucalyptus grandis
Eucgr.B03950 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58662356-58672355 Eucalyptus grandis
Eucgr.B03950 10.0kb downstream 10.0kb downstream 16314 true Chr02: 58672356-58688669 Eucalyptus grandis
Eucgr.B03950 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58678670-58688669 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066120 5270 Rosid View MSA
123744946 5271 Pentapetalae View MSA
122786630 5272 Eudicot View MSA
122050355 5273 Angiosperm View MSA
121311868 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.38911 0.0 19.1082    
cufflinks 4.25147 0.0 9.79939    
cufflinks 7.82765 0.0 20.1363    
cufflinks 1.83973 0.0 4.61833   Low
cufflinks 6.95355 0.0 15.9635    
cufflinks 7.14139 0.0 16.4915    

0 Strain