Gene : Eucgr.B03920 E. grandis v2.0
Defline:  (1 of 2) KOG3484 - Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins Genomic Order:  3177
Name:  ? Eucgr.B03920 Secondary Identifier:  ? PAC:32059309
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03920 0.5kb upstream 0.5kb upstream 1654 true Chr02: 58442407-58444060 Eucalyptus grandis
Eucgr.B03920 0.5kb upstream 0.5kb upstream 500 false Chr02: 58442407-58442906 Eucalyptus grandis
Eucgr.B03920 0.5kb downstream 0.5kb downstream 1654 true Chr02: 58442907-58444560 Eucalyptus grandis
Eucgr.B03920 0.5kb downstream 0.5kb downstream 500 false Chr02: 58444061-58444560 Eucalyptus grandis
Eucgr.B03920 1.0kb upstream 1.0kb upstream 2154 true Chr02: 58441907-58444060 Eucalyptus grandis
Eucgr.B03920 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58441907-58442906 Eucalyptus grandis
Eucgr.B03920 1.0kb downstream 1.0kb downstream 2154 true Chr02: 58442907-58445060 Eucalyptus grandis
Eucgr.B03920 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58444061-58445060 Eucalyptus grandis
Eucgr.B03920 2.0kb upstream 2.0kb upstream 3154 true Chr02: 58440907-58444060 Eucalyptus grandis
Eucgr.B03920 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58440907-58442906 Eucalyptus grandis
Eucgr.B03920 2.0kb downstream 2.0kb downstream 3154 true Chr02: 58442907-58446060 Eucalyptus grandis
Eucgr.B03920 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58444061-58446060 Eucalyptus grandis
Eucgr.B03920 5.0kb upstream 5.0kb upstream 6154 true Chr02: 58437907-58444060 Eucalyptus grandis
Eucgr.B03920 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58437907-58442906 Eucalyptus grandis
Eucgr.B03920 5.0kb downstream 5.0kb downstream 6154 true Chr02: 58442907-58449060 Eucalyptus grandis
Eucgr.B03920 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58444061-58449060 Eucalyptus grandis
Eucgr.B03920 10.0kb upstream 10.0kb upstream 11154 true Chr02: 58432907-58444060 Eucalyptus grandis
Eucgr.B03920 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58432907-58442906 Eucalyptus grandis
Eucgr.B03920 10.0kb downstream 10.0kb downstream 11154 true Chr02: 58442907-58454060 Eucalyptus grandis
Eucgr.B03920 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58444061-58454060 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2204 0.0 14.6534    
cufflinks 6.12468 0.0 16.8423    
cufflinks 5.70891 0.0 15.8994    
cufflinks 1.96847 0.0 6.16837   Low
cufflinks 6.48915 0.0 17.7948    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain