Gene : Eucgr.B03907 E. grandis v2.0
Defline:  (1 of 2) PTHR22891:SF40 - PROTEIN ARGONAUTE 5 Genomic Order:  3165
Name:  ? Eucgr.B03907 Secondary Identifier:  ? PAC:32059067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03907 0.5kb upstream 0.5kb upstream 8246 true Chr02: 58253913-58262158 Eucalyptus grandis
Eucgr.B03907 0.5kb upstream 0.5kb upstream 500 false Chr02: 58253913-58254412 Eucalyptus grandis
Eucgr.B03907 0.5kb downstream 0.5kb downstream 8246 true Chr02: 58254413-58262658 Eucalyptus grandis
Eucgr.B03907 0.5kb downstream 0.5kb downstream 500 false Chr02: 58262159-58262658 Eucalyptus grandis
Eucgr.B03907 1.0kb upstream 1.0kb upstream 8746 true Chr02: 58253413-58262158 Eucalyptus grandis
Eucgr.B03907 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58253413-58254412 Eucalyptus grandis
Eucgr.B03907 1.0kb downstream 1.0kb downstream 8746 true Chr02: 58254413-58263158 Eucalyptus grandis
Eucgr.B03907 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58262159-58263158 Eucalyptus grandis
Eucgr.B03907 2.0kb upstream 2.0kb upstream 9746 true Chr02: 58252413-58262158 Eucalyptus grandis
Eucgr.B03907 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58252413-58254412 Eucalyptus grandis
Eucgr.B03907 2.0kb downstream 2.0kb downstream 9746 true Chr02: 58254413-58264158 Eucalyptus grandis
Eucgr.B03907 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58262159-58264158 Eucalyptus grandis
Eucgr.B03907 5.0kb upstream 5.0kb upstream 12746 true Chr02: 58249413-58262158 Eucalyptus grandis
Eucgr.B03907 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58249413-58254412 Eucalyptus grandis
Eucgr.B03907 5.0kb downstream 5.0kb downstream 12746 true Chr02: 58254413-58267158 Eucalyptus grandis
Eucgr.B03907 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58262159-58267158 Eucalyptus grandis
Eucgr.B03907 10.0kb upstream 10.0kb upstream 17746 true Chr02: 58244413-58262158 Eucalyptus grandis
Eucgr.B03907 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58244413-58254412 Eucalyptus grandis
Eucgr.B03907 10.0kb downstream 10.0kb downstream 17746 true Chr02: 58254413-58272158 Eucalyptus grandis
Eucgr.B03907 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58262159-58272158 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
124068081 5270 Rosid View MSA
123740580 5271 Pentapetalae View MSA
122786970 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7884 0.0 26.1096    
cufflinks 3.2711 0.0 7.75317   Low
cufflinks 10.5688 0.0 23.4409    
cufflinks 6.52044 0.0 14.6797    
cufflinks 17.655 0.0 39.0954   High
cufflinks 6.18485 0.0 14.0167    

0 Strain