Gene : Eucgr.B03885 E. grandis v2.0

Defline:  (1 of 4) PTHR21470//PTHR21470:SF4 - NTKL-BINDING PROTEIN 1 Genomic Order:  3144
Name:  ? Eucgr.B03885 Secondary Identifier:  ? PAC:32061723

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03885 0.5kb upstream 0.5kb upstream 2401 true Chr02: 58064789-58067189 Eucalyptus grandis
Eucgr.B03885 0.5kb upstream 0.5kb upstream 500 false Chr02: 58064789-58065288 Eucalyptus grandis
Eucgr.B03885 0.5kb downstream 0.5kb downstream 2401 true Chr02: 58065289-58067689 Eucalyptus grandis
Eucgr.B03885 0.5kb downstream 0.5kb downstream 500 false Chr02: 58067190-58067689 Eucalyptus grandis
Eucgr.B03885 1.0kb upstream 1.0kb upstream 2901 true Chr02: 58064289-58067189 Eucalyptus grandis
Eucgr.B03885 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58064289-58065288 Eucalyptus grandis
Eucgr.B03885 1.0kb downstream 1.0kb downstream 2901 true Chr02: 58065289-58068189 Eucalyptus grandis
Eucgr.B03885 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58067190-58068189 Eucalyptus grandis
Eucgr.B03885 2.0kb upstream 2.0kb upstream 3901 true Chr02: 58063289-58067189 Eucalyptus grandis
Eucgr.B03885 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58063289-58065288 Eucalyptus grandis
Eucgr.B03885 2.0kb downstream 2.0kb downstream 3901 true Chr02: 58065289-58069189 Eucalyptus grandis
Eucgr.B03885 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58067190-58069189 Eucalyptus grandis
Eucgr.B03885 5.0kb upstream 5.0kb upstream 6901 true Chr02: 58060289-58067189 Eucalyptus grandis
Eucgr.B03885 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58060289-58065288 Eucalyptus grandis
Eucgr.B03885 5.0kb downstream 5.0kb downstream 6901 true Chr02: 58065289-58072189 Eucalyptus grandis
Eucgr.B03885 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58067190-58072189 Eucalyptus grandis
Eucgr.B03885 10.0kb upstream 10.0kb upstream 11901 true Chr02: 58055289-58067189 Eucalyptus grandis
Eucgr.B03885 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58055289-58065288 Eucalyptus grandis
Eucgr.B03885 10.0kb downstream 10.0kb downstream 11901 true Chr02: 58065289-58077189 Eucalyptus grandis
Eucgr.B03885 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58067190-58077189 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.759645 0.0 2.36329    
cufflinks 195.075 0.0 463.564 High High
cufflinks 0.625147 0.0 1.98256    
cufflinks 334.925 0.0 847.066 High High
cufflinks 13.312 0.0 30.8613    
cufflinks 1.81477 0.0 5.13535    

0 Strain