Gene : Eucgr.B03836 E. grandis v2.0
Defline:  (1 of 1) PTHR33083:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3100
Name:  ? Eucgr.B03836 Secondary Identifier:  ? PAC:32059695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03836 0.5kb upstream 0.5kb upstream 2449 true Chr02: 57679454-57681902 Eucalyptus grandis
Eucgr.B03836 0.5kb upstream 0.5kb upstream 500 false Chr02: 57681403-57681902 Eucalyptus grandis
Eucgr.B03836 0.5kb downstream 0.5kb downstream 2449 true Chr02: 57678954-57681402 Eucalyptus grandis
Eucgr.B03836 0.5kb downstream 0.5kb downstream 500 false Chr02: 57678954-57679453 Eucalyptus grandis
Eucgr.B03836 1.0kb upstream 1.0kb upstream 2949 true Chr02: 57679454-57682402 Eucalyptus grandis
Eucgr.B03836 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57681403-57682402 Eucalyptus grandis
Eucgr.B03836 1.0kb downstream 1.0kb downstream 2949 true Chr02: 57678454-57681402 Eucalyptus grandis
Eucgr.B03836 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57678454-57679453 Eucalyptus grandis
Eucgr.B03836 2.0kb upstream 2.0kb upstream 3949 true Chr02: 57679454-57683402 Eucalyptus grandis
Eucgr.B03836 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57681403-57683402 Eucalyptus grandis
Eucgr.B03836 2.0kb downstream 2.0kb downstream 3949 true Chr02: 57677454-57681402 Eucalyptus grandis
Eucgr.B03836 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57677454-57679453 Eucalyptus grandis
Eucgr.B03836 5.0kb upstream 5.0kb upstream 6949 true Chr02: 57679454-57686402 Eucalyptus grandis
Eucgr.B03836 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57681403-57686402 Eucalyptus grandis
Eucgr.B03836 5.0kb downstream 5.0kb downstream 6949 true Chr02: 57674454-57681402 Eucalyptus grandis
Eucgr.B03836 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57674454-57679453 Eucalyptus grandis
Eucgr.B03836 10.0kb upstream 10.0kb upstream 11949 true Chr02: 57679454-57691402 Eucalyptus grandis
Eucgr.B03836 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57681403-57691402 Eucalyptus grandis
Eucgr.B03836 10.0kb downstream 10.0kb downstream 11949 true Chr02: 57669454-57681402 Eucalyptus grandis
Eucgr.B03836 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57669454-57679453 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060830 5270 Rosid View MSA
123740315 5271 Pentapetalae View MSA
122789916 5272 Eudicot View MSA
122047516 5273 Angiosperm View MSA
121310750 5274 Embryophyte View MSA
123348161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.76 0.0 228.314 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 667.033 0.0 1707.43 High High
cufflinks 1.49659 0.0 4.56372   Low
cufflinks 1.79976 0.0 5.30936   Low
cufflinks 300.998 0.0 718.245 High  

0 Strain