Gene : Eucgr.B03832 E. grandis v2.0
Defline:  (1 of 2) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  3096
Name:  ? Eucgr.B03832 Secondary Identifier:  ? PAC:32059568
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6809 Eucalyptus grandis pathologic  
Egrandis PWY-695 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03832 0.5kb upstream 0.5kb upstream 2183 true Chr02: 57663126-57665308 Eucalyptus grandis
Eucgr.B03832 0.5kb upstream 0.5kb upstream 500 false Chr02: 57664809-57665308 Eucalyptus grandis
Eucgr.B03832 0.5kb downstream 0.5kb downstream 2183 true Chr02: 57662626-57664808 Eucalyptus grandis
Eucgr.B03832 0.5kb downstream 0.5kb downstream 500 false Chr02: 57662626-57663125 Eucalyptus grandis
Eucgr.B03832 1.0kb upstream 1.0kb upstream 2683 true Chr02: 57663126-57665808 Eucalyptus grandis
Eucgr.B03832 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57664809-57665808 Eucalyptus grandis
Eucgr.B03832 1.0kb downstream 1.0kb downstream 2683 true Chr02: 57662126-57664808 Eucalyptus grandis
Eucgr.B03832 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57662126-57663125 Eucalyptus grandis
Eucgr.B03832 2.0kb upstream 2.0kb upstream 3683 true Chr02: 57663126-57666808 Eucalyptus grandis
Eucgr.B03832 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57664809-57666808 Eucalyptus grandis
Eucgr.B03832 2.0kb downstream 2.0kb downstream 3683 true Chr02: 57661126-57664808 Eucalyptus grandis
Eucgr.B03832 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57661126-57663125 Eucalyptus grandis
Eucgr.B03832 5.0kb upstream 5.0kb upstream 6683 true Chr02: 57663126-57669808 Eucalyptus grandis
Eucgr.B03832 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57664809-57669808 Eucalyptus grandis
Eucgr.B03832 5.0kb downstream 5.0kb downstream 6683 true Chr02: 57658126-57664808 Eucalyptus grandis
Eucgr.B03832 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57658126-57663125 Eucalyptus grandis
Eucgr.B03832 10.0kb upstream 10.0kb upstream 11683 true Chr02: 57663126-57674808 Eucalyptus grandis
Eucgr.B03832 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57664809-57674808 Eucalyptus grandis
Eucgr.B03832 10.0kb downstream 10.0kb downstream 11683 true Chr02: 57653126-57664808 Eucalyptus grandis
Eucgr.B03832 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57653126-57663125 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070716 5270 Rosid View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.523588 0.0 1.62891   Low
cufflinks 0.780021 0.0 2.30828 Low  
cufflinks 1.51935 0.0 4.19419    
cufflinks 1.41477 0.0 3.92098    
cufflinks 1.93428 0.0 5.2237   High
cufflinks 0.789136 0.0 2.33314 Low  

0 Strain