Gene : Eucgr.C00613 E. grandis v2.0
Defline:  (1 of 1) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  491
Name:  ? Eucgr.C00613 Secondary Identifier:  ? PAC:32036909
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLUCOSE1PMETAB-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3881 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis PWY-882 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00613 0.5kb upstream 0.5kb upstream 5441 true Chr03: 11546667-11552107 Eucalyptus grandis
Eucgr.C00613 0.5kb upstream 0.5kb upstream 500 false Chr03: 11546667-11547166 Eucalyptus grandis
Eucgr.C00613 0.5kb downstream 0.5kb downstream 5441 true Chr03: 11547167-11552607 Eucalyptus grandis
Eucgr.C00613 0.5kb downstream 0.5kb downstream 500 false Chr03: 11552108-11552607 Eucalyptus grandis
Eucgr.C00613 1.0kb upstream 1.0kb upstream 5941 true Chr03: 11546167-11552107 Eucalyptus grandis
Eucgr.C00613 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11546167-11547166 Eucalyptus grandis
Eucgr.C00613 1.0kb downstream 1.0kb downstream 5941 true Chr03: 11547167-11553107 Eucalyptus grandis
Eucgr.C00613 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11552108-11553107 Eucalyptus grandis
Eucgr.C00613 2.0kb upstream 2.0kb upstream 6941 true Chr03: 11545167-11552107 Eucalyptus grandis
Eucgr.C00613 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11545167-11547166 Eucalyptus grandis
Eucgr.C00613 2.0kb downstream 2.0kb downstream 6941 true Chr03: 11547167-11554107 Eucalyptus grandis
Eucgr.C00613 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11552108-11554107 Eucalyptus grandis
Eucgr.C00613 5.0kb upstream 5.0kb upstream 9941 true Chr03: 11542167-11552107 Eucalyptus grandis
Eucgr.C00613 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11542167-11547166 Eucalyptus grandis
Eucgr.C00613 5.0kb downstream 5.0kb downstream 9941 true Chr03: 11547167-11557107 Eucalyptus grandis
Eucgr.C00613 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11552108-11557107 Eucalyptus grandis
Eucgr.C00613 10.0kb upstream 10.0kb upstream 14941 true Chr03: 11537167-11552107 Eucalyptus grandis
Eucgr.C00613 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11537167-11547166 Eucalyptus grandis
Eucgr.C00613 10.0kb downstream 10.0kb downstream 14941 true Chr03: 11547167-11562107 Eucalyptus grandis
Eucgr.C00613 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11552108-11562107 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.60669 0.0 15.3748    
cufflinks 4.20092 0.0 10.1299    
cufflinks 5.2315 0.0 12.3819    
cufflinks 3.4699 0.0 8.50962   Low
cufflinks 6.10908 0.0 14.2702    
cufflinks 8.79873 0.0 20.0638   High

0 Strain