Gene : Eucgr.C00555 E. grandis v2.0
Genomic Order:  397 Name:  ? Eucgr.C00555
Secondary Identifier:  ? PAC:32040046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00555 0.5kb upstream 0.5kb upstream 4369 true Chr03: 8789833-8794201 Eucalyptus grandis
Eucgr.C00555 0.5kb upstream 0.5kb upstream 500 false Chr03: 8789833-8790332 Eucalyptus grandis
Eucgr.C00555 0.5kb downstream 0.5kb downstream 4369 true Chr03: 8790333-8794701 Eucalyptus grandis
Eucgr.C00555 0.5kb downstream 0.5kb downstream 500 false Chr03: 8794202-8794701 Eucalyptus grandis
Eucgr.C00555 1.0kb upstream 1.0kb upstream 4869 true Chr03: 8789333-8794201 Eucalyptus grandis
Eucgr.C00555 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8789333-8790332 Eucalyptus grandis
Eucgr.C00555 1.0kb downstream 1.0kb downstream 4869 true Chr03: 8790333-8795201 Eucalyptus grandis
Eucgr.C00555 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8794202-8795201 Eucalyptus grandis
Eucgr.C00555 2.0kb upstream 2.0kb upstream 5869 true Chr03: 8788333-8794201 Eucalyptus grandis
Eucgr.C00555 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8788333-8790332 Eucalyptus grandis
Eucgr.C00555 2.0kb downstream 2.0kb downstream 5869 true Chr03: 8790333-8796201 Eucalyptus grandis
Eucgr.C00555 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8794202-8796201 Eucalyptus grandis
Eucgr.C00555 5.0kb upstream 5.0kb upstream 8869 true Chr03: 8785333-8794201 Eucalyptus grandis
Eucgr.C00555 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8785333-8790332 Eucalyptus grandis
Eucgr.C00555 5.0kb downstream 5.0kb downstream 8869 true Chr03: 8790333-8799201 Eucalyptus grandis
Eucgr.C00555 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8794202-8799201 Eucalyptus grandis
Eucgr.C00555 10.0kb upstream 10.0kb upstream 13869 true Chr03: 8780333-8794201 Eucalyptus grandis
Eucgr.C00555 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8780333-8790332 Eucalyptus grandis
Eucgr.C00555 10.0kb downstream 10.0kb downstream 13869 true Chr03: 8790333-8804201 Eucalyptus grandis
Eucgr.C00555 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8794202-8804201 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09486 0.0 12.6762    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.88621 0.0 12.154    
cufflinks 6.24645 0.0 18.3301    
cufflinks 0.641392 0.0 3.03964 Low Low
cufflinks 2.78811 0.0 9.88776    

0 Strain