Gene : Eucgr.C00496 E. grandis v2.0
Defline:  (1 of 5) KOG1867 - Ubiquitin-specific protease Genomic Order:  364
Name:  ? Eucgr.C00496 Secondary Identifier:  ? PAC:32037067
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00496 0.5kb upstream 0.5kb upstream 4267 true Chr03: 7447564-7451830 Eucalyptus grandis
Eucgr.C00496 0.5kb upstream 0.5kb upstream 500 false Chr03: 7447564-7448063 Eucalyptus grandis
Eucgr.C00496 0.5kb downstream 0.5kb downstream 4267 true Chr03: 7448064-7452330 Eucalyptus grandis
Eucgr.C00496 0.5kb downstream 0.5kb downstream 500 false Chr03: 7451831-7452330 Eucalyptus grandis
Eucgr.C00496 1.0kb upstream 1.0kb upstream 4767 true Chr03: 7447064-7451830 Eucalyptus grandis
Eucgr.C00496 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7447064-7448063 Eucalyptus grandis
Eucgr.C00496 1.0kb downstream 1.0kb downstream 4767 true Chr03: 7448064-7452830 Eucalyptus grandis
Eucgr.C00496 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7451831-7452830 Eucalyptus grandis
Eucgr.C00496 2.0kb upstream 2.0kb upstream 5767 true Chr03: 7446064-7451830 Eucalyptus grandis
Eucgr.C00496 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7446064-7448063 Eucalyptus grandis
Eucgr.C00496 2.0kb downstream 2.0kb downstream 5767 true Chr03: 7448064-7453830 Eucalyptus grandis
Eucgr.C00496 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7451831-7453830 Eucalyptus grandis
Eucgr.C00496 5.0kb upstream 5.0kb upstream 8767 true Chr03: 7443064-7451830 Eucalyptus grandis
Eucgr.C00496 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7443064-7448063 Eucalyptus grandis
Eucgr.C00496 5.0kb downstream 5.0kb downstream 8767 true Chr03: 7448064-7456830 Eucalyptus grandis
Eucgr.C00496 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7451831-7456830 Eucalyptus grandis
Eucgr.C00496 10.0kb upstream 10.0kb upstream 13767 true Chr03: 7438064-7451830 Eucalyptus grandis
Eucgr.C00496 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7438064-7448063 Eucalyptus grandis
Eucgr.C00496 10.0kb downstream 10.0kb downstream 13767 true Chr03: 7448064-7461830 Eucalyptus grandis
Eucgr.C00496 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7451831-7461830 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070704 5270 Rosid View MSA
123736956 5271 Pentapetalae View MSA
122795648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95108 0.0 7.65417    
cufflinks 2.50306 0.0 6.60655   Low
cufflinks 2.64871 0.0 6.962    
cufflinks 3.43283 0.0 8.64842   High
cufflinks 3.29453 0.0 8.41487    
cufflinks 2.974 0.0 7.59926    

0 Strain