Gene : Eucgr.C00455 E. grandis v2.0
Defline:  (1 of 7) PTHR14222:SF1 - CONDENSIN-2 COMPLEX SUBUNIT D3 Genomic Order:  333
Name:  ? Eucgr.C00455 Secondary Identifier:  ? PAC:32035919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00455 0.5kb upstream 0.5kb upstream 7474 true Chr03: 6982080-6989553 Eucalyptus grandis
Eucgr.C00455 0.5kb upstream 0.5kb upstream 500 false Chr03: 6989054-6989553 Eucalyptus grandis
Eucgr.C00455 0.5kb downstream 0.5kb downstream 7474 true Chr03: 6981580-6989053 Eucalyptus grandis
Eucgr.C00455 0.5kb downstream 0.5kb downstream 500 false Chr03: 6981580-6982079 Eucalyptus grandis
Eucgr.C00455 1.0kb upstream 1.0kb upstream 7974 true Chr03: 6982080-6990053 Eucalyptus grandis
Eucgr.C00455 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6989054-6990053 Eucalyptus grandis
Eucgr.C00455 1.0kb downstream 1.0kb downstream 7974 true Chr03: 6981080-6989053 Eucalyptus grandis
Eucgr.C00455 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6981080-6982079 Eucalyptus grandis
Eucgr.C00455 2.0kb upstream 2.0kb upstream 8974 true Chr03: 6982080-6991053 Eucalyptus grandis
Eucgr.C00455 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6989054-6991053 Eucalyptus grandis
Eucgr.C00455 2.0kb downstream 2.0kb downstream 8974 true Chr03: 6980080-6989053 Eucalyptus grandis
Eucgr.C00455 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6980080-6982079 Eucalyptus grandis
Eucgr.C00455 5.0kb upstream 5.0kb upstream 11974 true Chr03: 6982080-6994053 Eucalyptus grandis
Eucgr.C00455 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6989054-6994053 Eucalyptus grandis
Eucgr.C00455 5.0kb downstream 5.0kb downstream 11974 true Chr03: 6977080-6989053 Eucalyptus grandis
Eucgr.C00455 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6977080-6982079 Eucalyptus grandis
Eucgr.C00455 10.0kb upstream 10.0kb upstream 16974 true Chr03: 6982080-6999053 Eucalyptus grandis
Eucgr.C00455 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6989054-6999053 Eucalyptus grandis
Eucgr.C00455 10.0kb downstream 10.0kb downstream 16974 true Chr03: 6972080-6989053 Eucalyptus grandis
Eucgr.C00455 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6972080-6982079 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027913 5273 Angiosperm View MSA
124063856 5270 Rosid View MSA
123739456 5271 Pentapetalae View MSA
122787593 5272 Eudicot View MSA
121345565 5274 Embryophyte View MSA
123425624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.42519 0.0 8.02397    
cufflinks 2.97072 0.0 7.00278    
cufflinks 2.35695 0.0 5.69119    
cufflinks 1.73178 0.0 4.29333    
cufflinks 4.26209 0.0 9.78418   High
cufflinks 1.2353 0.0 3.21453   Low

0 Strain