Gene : Eucgr.C00479 E. grandis v2.0
Defline:  (1 of 2) PTHR12294 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  348
Name:  ? Eucgr.C00479 Secondary Identifier:  ? PAC:32039938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00479 0.5kb upstream 0.5kb upstream 2812 true Chr03: 7309885-7312696 Eucalyptus grandis
Eucgr.C00479 0.5kb upstream 0.5kb upstream 500 false Chr03: 7309885-7310384 Eucalyptus grandis
Eucgr.C00479 0.5kb downstream 0.5kb downstream 2812 true Chr03: 7310385-7313196 Eucalyptus grandis
Eucgr.C00479 0.5kb downstream 0.5kb downstream 500 false Chr03: 7312697-7313196 Eucalyptus grandis
Eucgr.C00479 1.0kb upstream 1.0kb upstream 3312 true Chr03: 7309385-7312696 Eucalyptus grandis
Eucgr.C00479 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7309385-7310384 Eucalyptus grandis
Eucgr.C00479 1.0kb downstream 1.0kb downstream 3312 true Chr03: 7310385-7313696 Eucalyptus grandis
Eucgr.C00479 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7312697-7313696 Eucalyptus grandis
Eucgr.C00479 2.0kb upstream 2.0kb upstream 4312 true Chr03: 7308385-7312696 Eucalyptus grandis
Eucgr.C00479 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7308385-7310384 Eucalyptus grandis
Eucgr.C00479 2.0kb downstream 2.0kb downstream 4312 true Chr03: 7310385-7314696 Eucalyptus grandis
Eucgr.C00479 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7312697-7314696 Eucalyptus grandis
Eucgr.C00479 5.0kb upstream 5.0kb upstream 7312 true Chr03: 7305385-7312696 Eucalyptus grandis
Eucgr.C00479 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7305385-7310384 Eucalyptus grandis
Eucgr.C00479 5.0kb downstream 5.0kb downstream 7312 true Chr03: 7310385-7317696 Eucalyptus grandis
Eucgr.C00479 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7312697-7317696 Eucalyptus grandis
Eucgr.C00479 10.0kb upstream 10.0kb upstream 12312 true Chr03: 7300385-7312696 Eucalyptus grandis
Eucgr.C00479 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7300385-7310384 Eucalyptus grandis
Eucgr.C00479 10.0kb downstream 10.0kb downstream 12312 true Chr03: 7310385-7322696 Eucalyptus grandis
Eucgr.C00479 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7312697-7322696 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051257 5270 Rosid View MSA
123620085 5271 Pentapetalae View MSA
122654502 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.01364 0.0 18.9957    
cufflinks 0.418386 0.0 1.34698 Low Low
cufflinks 10.4094 0.0 24.0845    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.36889 0.0 6.36656    

0 Strain