Gene : Eucgr.C00460 E. grandis v2.0
Defline:  (1 of 7) PTHR14222:SF1 - CONDENSIN-2 COMPLEX SUBUNIT D3 Genomic Order:  337
Name:  ? Eucgr.C00460 Secondary Identifier:  ? PAC:32035966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00460 0.5kb upstream 0.5kb upstream 7591 true Chr03: 7028497-7036087 Eucalyptus grandis
Eucgr.C00460 0.5kb upstream 0.5kb upstream 500 false Chr03: 7035588-7036087 Eucalyptus grandis
Eucgr.C00460 0.5kb downstream 0.5kb downstream 7591 true Chr03: 7027997-7035587 Eucalyptus grandis
Eucgr.C00460 0.5kb downstream 0.5kb downstream 500 false Chr03: 7027997-7028496 Eucalyptus grandis
Eucgr.C00460 1.0kb upstream 1.0kb upstream 8091 true Chr03: 7028497-7036587 Eucalyptus grandis
Eucgr.C00460 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7035588-7036587 Eucalyptus grandis
Eucgr.C00460 1.0kb downstream 1.0kb downstream 8091 true Chr03: 7027497-7035587 Eucalyptus grandis
Eucgr.C00460 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7027497-7028496 Eucalyptus grandis
Eucgr.C00460 2.0kb upstream 2.0kb upstream 9091 true Chr03: 7028497-7037587 Eucalyptus grandis
Eucgr.C00460 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7035588-7037587 Eucalyptus grandis
Eucgr.C00460 2.0kb downstream 2.0kb downstream 9091 true Chr03: 7026497-7035587 Eucalyptus grandis
Eucgr.C00460 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7026497-7028496 Eucalyptus grandis
Eucgr.C00460 5.0kb upstream 5.0kb upstream 12091 true Chr03: 7028497-7040587 Eucalyptus grandis
Eucgr.C00460 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7035588-7040587 Eucalyptus grandis
Eucgr.C00460 5.0kb downstream 5.0kb downstream 12091 true Chr03: 7023497-7035587 Eucalyptus grandis
Eucgr.C00460 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7023497-7028496 Eucalyptus grandis
Eucgr.C00460 10.0kb upstream 10.0kb upstream 17091 true Chr03: 7028497-7045587 Eucalyptus grandis
Eucgr.C00460 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7035588-7045587 Eucalyptus grandis
Eucgr.C00460 10.0kb downstream 10.0kb downstream 17091 true Chr03: 7018497-7035587 Eucalyptus grandis
Eucgr.C00460 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7018497-7028496 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027913 5273 Angiosperm View MSA
124063856 5270 Rosid View MSA
123739456 5271 Pentapetalae View MSA
122787593 5272 Eudicot View MSA
121345565 5274 Embryophyte View MSA
123425624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93022 0.0 4.78585    
cufflinks 0.978567 0.0 2.57777    
cufflinks 1.45832 0.0 3.70417    
cufflinks 0.648507 0.0 1.77578    
cufflinks 1.34953 0.0 3.45765    
cufflinks 0.0802889 0.0 0.287765 Low Low

0 Strain