Gene : Eucgr.C00350 E. grandis v2.0

Defline:  (1 of 4) PTHR11673 - TRANSLATION INITIATION FACTOR 5A-RELATED Genomic Order:  237
Name:  ? Eucgr.C00350 Secondary Identifier:  ? PAC:32036543

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00350 0.5kb upstream 0.5kb upstream 2941 true Chr03: 5768321-5771261 Eucalyptus grandis
Eucgr.C00350 0.5kb upstream 0.5kb upstream 500 false Chr03: 5770762-5771261 Eucalyptus grandis
Eucgr.C00350 0.5kb downstream 0.5kb downstream 2941 true Chr03: 5767821-5770761 Eucalyptus grandis
Eucgr.C00350 0.5kb downstream 0.5kb downstream 500 false Chr03: 5767821-5768320 Eucalyptus grandis
Eucgr.C00350 1.0kb upstream 1.0kb upstream 3441 true Chr03: 5768321-5771761 Eucalyptus grandis
Eucgr.C00350 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5770762-5771761 Eucalyptus grandis
Eucgr.C00350 1.0kb downstream 1.0kb downstream 3441 true Chr03: 5767321-5770761 Eucalyptus grandis
Eucgr.C00350 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5767321-5768320 Eucalyptus grandis
Eucgr.C00350 2.0kb upstream 2.0kb upstream 4441 true Chr03: 5768321-5772761 Eucalyptus grandis
Eucgr.C00350 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5770762-5772761 Eucalyptus grandis
Eucgr.C00350 2.0kb downstream 2.0kb downstream 4441 true Chr03: 5766321-5770761 Eucalyptus grandis
Eucgr.C00350 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5766321-5768320 Eucalyptus grandis
Eucgr.C00350 5.0kb upstream 5.0kb upstream 7441 true Chr03: 5768321-5775761 Eucalyptus grandis
Eucgr.C00350 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5770762-5775761 Eucalyptus grandis
Eucgr.C00350 5.0kb downstream 5.0kb downstream 7441 true Chr03: 5763321-5770761 Eucalyptus grandis
Eucgr.C00350 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5763321-5768320 Eucalyptus grandis
Eucgr.C00350 10.0kb upstream 10.0kb upstream 12441 true Chr03: 5768321-5780761 Eucalyptus grandis
Eucgr.C00350 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5770762-5780761 Eucalyptus grandis
Eucgr.C00350 10.0kb downstream 10.0kb downstream 12441 true Chr03: 5758321-5770761 Eucalyptus grandis
Eucgr.C00350 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5758321-5768320 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072640 5270 Rosid View MSA
123750235 5271 Pentapetalae View MSA
122796875 5272 Eudicot View MSA
122047476 5273 Angiosperm View MSA
121345847 5274 Embryophyte View MSA
123426583 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 111.118 0.0 261.695 High  
cufflinks 119.417 0.0 284.853 High  
cufflinks 101.142 0.0 235.2 High  
cufflinks 131.758 0.0 357.025 High  
cufflinks 177.195 0.0 408.127 High High
cufflinks 82.8942 0.0 205.324 High Low

0 Strain