Gene : Eucgr.C00253 E. grandis v2.0
Defline:  (1 of 2) PTHR11802:SF87 - SERINE CARBOXYPEPTIDASE 24-RELATED Genomic Order:  184
Name:  ? Eucgr.C00253 Secondary Identifier:  ? PAC:32036973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00253 0.5kb upstream 0.5kb upstream 4026 true Chr03: 2131663-2135688 Eucalyptus grandis
Eucgr.C00253 0.5kb upstream 0.5kb upstream 500 false Chr03: 2135189-2135688 Eucalyptus grandis
Eucgr.C00253 0.5kb downstream 0.5kb downstream 4026 true Chr03: 2131163-2135188 Eucalyptus grandis
Eucgr.C00253 0.5kb downstream 0.5kb downstream 500 false Chr03: 2131163-2131662 Eucalyptus grandis
Eucgr.C00253 1.0kb upstream 1.0kb upstream 4526 true Chr03: 2131663-2136188 Eucalyptus grandis
Eucgr.C00253 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2135189-2136188 Eucalyptus grandis
Eucgr.C00253 1.0kb downstream 1.0kb downstream 4526 true Chr03: 2130663-2135188 Eucalyptus grandis
Eucgr.C00253 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2130663-2131662 Eucalyptus grandis
Eucgr.C00253 2.0kb upstream 2.0kb upstream 5526 true Chr03: 2131663-2137188 Eucalyptus grandis
Eucgr.C00253 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2135189-2137188 Eucalyptus grandis
Eucgr.C00253 2.0kb downstream 2.0kb downstream 5526 true Chr03: 2129663-2135188 Eucalyptus grandis
Eucgr.C00253 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2129663-2131662 Eucalyptus grandis
Eucgr.C00253 5.0kb upstream 5.0kb upstream 8526 true Chr03: 2131663-2140188 Eucalyptus grandis
Eucgr.C00253 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2135189-2140188 Eucalyptus grandis
Eucgr.C00253 5.0kb downstream 5.0kb downstream 8526 true Chr03: 2126663-2135188 Eucalyptus grandis
Eucgr.C00253 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2126663-2131662 Eucalyptus grandis
Eucgr.C00253 10.0kb upstream 10.0kb upstream 13526 true Chr03: 2131663-2145188 Eucalyptus grandis
Eucgr.C00253 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2135189-2145188 Eucalyptus grandis
Eucgr.C00253 10.0kb downstream 10.0kb downstream 13526 true Chr03: 2121663-2135188 Eucalyptus grandis
Eucgr.C00253 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2121663-2131662 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041243 5273 Angiosperm View MSA
124062355 5270 Rosid View MSA
123741217 5271 Pentapetalae View MSA
122786127 5272 Eudicot View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82213 0.0 5.0649    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.324456 0.0 1.10823 Low Low
cufflinks 1.23066 0.0 3.55843    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.66135 0.0 7.15256    

0 Strain