Gene : Eucgr.C00229 E. grandis v2.0
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  161
Name:  ? Eucgr.C00229 Secondary Identifier:  ? PAC:32037045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5381 Eucalyptus grandis pathologic  
Egrandis PWY-5695 Eucalyptus grandis pathologic  
Egrandis PWY-6596 Eucalyptus grandis pathologic  
Egrandis PWY-6606 Eucalyptus grandis pathologic  
Egrandis PWY-6608 Eucalyptus grandis pathologic  
Egrandis PWY-7185 Eucalyptus grandis pathologic  
Egrandis SALVADEHYPOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00229 0.5kb upstream 0.5kb upstream 7602 true Chr03: 1892764-1900365 Eucalyptus grandis
Eucgr.C00229 0.5kb upstream 0.5kb upstream 500 false Chr03: 1899866-1900365 Eucalyptus grandis
Eucgr.C00229 0.5kb downstream 0.5kb downstream 7602 true Chr03: 1892264-1899865 Eucalyptus grandis
Eucgr.C00229 0.5kb downstream 0.5kb downstream 500 false Chr03: 1892264-1892763 Eucalyptus grandis
Eucgr.C00229 1.0kb upstream 1.0kb upstream 8102 true Chr03: 1892764-1900865 Eucalyptus grandis
Eucgr.C00229 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1899866-1900865 Eucalyptus grandis
Eucgr.C00229 1.0kb downstream 1.0kb downstream 8102 true Chr03: 1891764-1899865 Eucalyptus grandis
Eucgr.C00229 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1891764-1892763 Eucalyptus grandis
Eucgr.C00229 2.0kb upstream 2.0kb upstream 9102 true Chr03: 1892764-1901865 Eucalyptus grandis
Eucgr.C00229 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1899866-1901865 Eucalyptus grandis
Eucgr.C00229 2.0kb downstream 2.0kb downstream 9102 true Chr03: 1890764-1899865 Eucalyptus grandis
Eucgr.C00229 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1890764-1892763 Eucalyptus grandis
Eucgr.C00229 5.0kb upstream 5.0kb upstream 12102 true Chr03: 1892764-1904865 Eucalyptus grandis
Eucgr.C00229 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1899866-1904865 Eucalyptus grandis
Eucgr.C00229 5.0kb downstream 5.0kb downstream 12102 true Chr03: 1887764-1899865 Eucalyptus grandis
Eucgr.C00229 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1887764-1892763 Eucalyptus grandis
Eucgr.C00229 10.0kb upstream 10.0kb upstream 17102 true Chr03: 1892764-1909865 Eucalyptus grandis
Eucgr.C00229 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1899866-1909865 Eucalyptus grandis
Eucgr.C00229 10.0kb downstream 10.0kb downstream 17102 true Chr03: 1882764-1899865 Eucalyptus grandis
Eucgr.C00229 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1882764-1892763 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.09233 0.0 14.231   High
cufflinks 3.67018 0.0 8.9101    
cufflinks 3.62401 0.0 8.84202    
cufflinks 3.81307 0.0 9.2061    
cufflinks 3.17026 0.0 7.83962   Low
cufflinks 4.54518 0.0 10.9514    

0 Strain