Gene : Eucgr.C00200 E. grandis v2.0
Genomic Order:  135 Name:  ? Eucgr.C00200
Secondary Identifier:  ? PAC:32036896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00200 0.5kb upstream 0.5kb upstream 1281 true Chr03: 1610741-1612021 Eucalyptus grandis
Eucgr.C00200 0.5kb upstream 0.5kb upstream 500 false Chr03: 1610741-1611240 Eucalyptus grandis
Eucgr.C00200 0.5kb downstream 0.5kb downstream 1281 true Chr03: 1611241-1612521 Eucalyptus grandis
Eucgr.C00200 0.5kb downstream 0.5kb downstream 500 false Chr03: 1612022-1612521 Eucalyptus grandis
Eucgr.C00200 1.0kb upstream 1.0kb upstream 1781 true Chr03: 1610241-1612021 Eucalyptus grandis
Eucgr.C00200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1610241-1611240 Eucalyptus grandis
Eucgr.C00200 1.0kb downstream 1.0kb downstream 1781 true Chr03: 1611241-1613021 Eucalyptus grandis
Eucgr.C00200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1612022-1613021 Eucalyptus grandis
Eucgr.C00200 2.0kb upstream 2.0kb upstream 2781 true Chr03: 1609241-1612021 Eucalyptus grandis
Eucgr.C00200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1609241-1611240 Eucalyptus grandis
Eucgr.C00200 2.0kb downstream 2.0kb downstream 2781 true Chr03: 1611241-1614021 Eucalyptus grandis
Eucgr.C00200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1612022-1614021 Eucalyptus grandis
Eucgr.C00200 5.0kb upstream 5.0kb upstream 5781 true Chr03: 1606241-1612021 Eucalyptus grandis
Eucgr.C00200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1606241-1611240 Eucalyptus grandis
Eucgr.C00200 5.0kb downstream 5.0kb downstream 5781 true Chr03: 1611241-1617021 Eucalyptus grandis
Eucgr.C00200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1612022-1617021 Eucalyptus grandis
Eucgr.C00200 10.0kb upstream 10.0kb upstream 10781 true Chr03: 1601241-1612021 Eucalyptus grandis
Eucgr.C00200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1601241-1611240 Eucalyptus grandis
Eucgr.C00200 10.0kb downstream 10.0kb downstream 10781 true Chr03: 1611241-1622021 Eucalyptus grandis
Eucgr.C00200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1612022-1622021 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121659988 5273 Angiosperm Singleton cluster - no MSA
124044262 5270 Rosid Singleton cluster - no MSA
123614303 5271 Pentapetalae Singleton cluster - no MSA
122648775 5272 Eudicot Singleton cluster - no MSA
120931957 5274 Embryophyte Singleton cluster - no MSA
122972449 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.51242 0.0 23.7085    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.8484 0.0 17.7378   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.57664 0.0 21.5252    

0 Strain