Gene : Eucgr.C00220 E. grandis v2.0
Defline:  (1 of 6) 1.9.3.1 - Cytochrome-c oxidase / Warburg's respiratory enzyme Genomic Order:  153
Name:  ? Eucgr.C00220 Secondary Identifier:  ? PAC:32038975
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-7279 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00220 0.5kb upstream 0.5kb upstream 4060 true Chr03: 1825845-1829904 Eucalyptus grandis
Eucgr.C00220 0.5kb upstream 0.5kb upstream 500 false Chr03: 1829405-1829904 Eucalyptus grandis
Eucgr.C00220 0.5kb downstream 0.5kb downstream 4060 true Chr03: 1825345-1829404 Eucalyptus grandis
Eucgr.C00220 0.5kb downstream 0.5kb downstream 500 false Chr03: 1825345-1825844 Eucalyptus grandis
Eucgr.C00220 1.0kb upstream 1.0kb upstream 4560 true Chr03: 1825845-1830404 Eucalyptus grandis
Eucgr.C00220 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1829405-1830404 Eucalyptus grandis
Eucgr.C00220 1.0kb downstream 1.0kb downstream 4560 true Chr03: 1824845-1829404 Eucalyptus grandis
Eucgr.C00220 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1824845-1825844 Eucalyptus grandis
Eucgr.C00220 2.0kb upstream 2.0kb upstream 5560 true Chr03: 1825845-1831404 Eucalyptus grandis
Eucgr.C00220 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1829405-1831404 Eucalyptus grandis
Eucgr.C00220 2.0kb downstream 2.0kb downstream 5560 true Chr03: 1823845-1829404 Eucalyptus grandis
Eucgr.C00220 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1823845-1825844 Eucalyptus grandis
Eucgr.C00220 5.0kb upstream 5.0kb upstream 8560 true Chr03: 1825845-1834404 Eucalyptus grandis
Eucgr.C00220 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1829405-1834404 Eucalyptus grandis
Eucgr.C00220 5.0kb downstream 5.0kb downstream 8560 true Chr03: 1820845-1829404 Eucalyptus grandis
Eucgr.C00220 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1820845-1825844 Eucalyptus grandis
Eucgr.C00220 10.0kb upstream 10.0kb upstream 13560 true Chr03: 1825845-1839404 Eucalyptus grandis
Eucgr.C00220 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1829405-1839404 Eucalyptus grandis
Eucgr.C00220 10.0kb downstream 10.0kb downstream 13560 true Chr03: 1815845-1829404 Eucalyptus grandis
Eucgr.C00220 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1815845-1825844 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068898 5270 Rosid View MSA
123741112 5271 Pentapetalae View MSA
122785907 5272 Eudicot View MSA
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.9864 0.0 168.176 High  
cufflinks 76.6661 0.0 169.58 High  
cufflinks 52.2528 0.0 116.599 High  
cufflinks 131.258 0.0 291.887 High High
cufflinks 130.093 0.0 289.065 High High
cufflinks 37.2229 0.0 84.8795 High Low

0 Strain