Gene : Eucgr.C00157 E. grandis v2.0
Defline:  (1 of 1) PTHR22942:SF24 - DNA REPAIR PROTEIN XRCC3 Genomic Order:  96
Name:  ? Eucgr.C00157 Secondary Identifier:  ? PAC:32039093
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00157 0.5kb upstream 0.5kb upstream 1562 true Chr03: 1190241-1191802 Eucalyptus grandis
Eucgr.C00157 0.5kb upstream 0.5kb upstream 500 false Chr03: 1190241-1190740 Eucalyptus grandis
Eucgr.C00157 0.5kb downstream 0.5kb downstream 1562 true Chr03: 1190741-1192302 Eucalyptus grandis
Eucgr.C00157 0.5kb downstream 0.5kb downstream 500 false Chr03: 1191803-1192302 Eucalyptus grandis
Eucgr.C00157 1.0kb upstream 1.0kb upstream 2062 true Chr03: 1189741-1191802 Eucalyptus grandis
Eucgr.C00157 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1189741-1190740 Eucalyptus grandis
Eucgr.C00157 1.0kb downstream 1.0kb downstream 2062 true Chr03: 1190741-1192802 Eucalyptus grandis
Eucgr.C00157 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1191803-1192802 Eucalyptus grandis
Eucgr.C00157 2.0kb upstream 2.0kb upstream 3062 true Chr03: 1188741-1191802 Eucalyptus grandis
Eucgr.C00157 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1188741-1190740 Eucalyptus grandis
Eucgr.C00157 2.0kb downstream 2.0kb downstream 3062 true Chr03: 1190741-1193802 Eucalyptus grandis
Eucgr.C00157 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1191803-1193802 Eucalyptus grandis
Eucgr.C00157 5.0kb upstream 5.0kb upstream 6062 true Chr03: 1185741-1191802 Eucalyptus grandis
Eucgr.C00157 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1185741-1190740 Eucalyptus grandis
Eucgr.C00157 5.0kb downstream 5.0kb downstream 6062 true Chr03: 1190741-1196802 Eucalyptus grandis
Eucgr.C00157 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1191803-1196802 Eucalyptus grandis
Eucgr.C00157 10.0kb upstream 10.0kb upstream 11062 true Chr03: 1180741-1191802 Eucalyptus grandis
Eucgr.C00157 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1180741-1190740 Eucalyptus grandis
Eucgr.C00157 10.0kb downstream 10.0kb downstream 11062 true Chr03: 1190741-1201802 Eucalyptus grandis
Eucgr.C00157 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1191803-1201802 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069391 5270 Rosid View MSA
123741903 5271 Pentapetalae View MSA
122794099 5272 Eudicot View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74859 0.0 5.18582    
cufflinks 12.8299 0.0 31.1472   High
cufflinks 1.06139 0.0 3.36603    
cufflinks 1.71737 0.0 5.12687    
cufflinks 0.639122 0.0 2.16366 Low Low
cufflinks 3.4447 0.0 9.46498    

0 Strain