Gene : Eucgr.C00153 E. grandis v2.0
Defline:  (1 of 1) PF11559 - Afadin- and alpha -actinin-Binding (ADIP) Genomic Order:  92
Name:  ? Eucgr.C00153 Secondary Identifier:  ? PAC:32039713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00153 0.5kb upstream 0.5kb upstream 5252 true Chr03: 1149234-1154485 Eucalyptus grandis
Eucgr.C00153 0.5kb upstream 0.5kb upstream 500 false Chr03: 1153986-1154485 Eucalyptus grandis
Eucgr.C00153 0.5kb downstream 0.5kb downstream 5252 true Chr03: 1148734-1153985 Eucalyptus grandis
Eucgr.C00153 0.5kb downstream 0.5kb downstream 500 false Chr03: 1148734-1149233 Eucalyptus grandis
Eucgr.C00153 1.0kb upstream 1.0kb upstream 5752 true Chr03: 1149234-1154985 Eucalyptus grandis
Eucgr.C00153 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1153986-1154985 Eucalyptus grandis
Eucgr.C00153 1.0kb downstream 1.0kb downstream 5752 true Chr03: 1148234-1153985 Eucalyptus grandis
Eucgr.C00153 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1148234-1149233 Eucalyptus grandis
Eucgr.C00153 2.0kb upstream 2.0kb upstream 6752 true Chr03: 1149234-1155985 Eucalyptus grandis
Eucgr.C00153 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1153986-1155985 Eucalyptus grandis
Eucgr.C00153 2.0kb downstream 2.0kb downstream 6752 true Chr03: 1147234-1153985 Eucalyptus grandis
Eucgr.C00153 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1147234-1149233 Eucalyptus grandis
Eucgr.C00153 5.0kb upstream 5.0kb upstream 9752 true Chr03: 1149234-1158985 Eucalyptus grandis
Eucgr.C00153 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1153986-1158985 Eucalyptus grandis
Eucgr.C00153 5.0kb downstream 5.0kb downstream 9752 true Chr03: 1144234-1153985 Eucalyptus grandis
Eucgr.C00153 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1144234-1149233 Eucalyptus grandis
Eucgr.C00153 10.0kb upstream 10.0kb upstream 14752 true Chr03: 1149234-1163985 Eucalyptus grandis
Eucgr.C00153 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1153986-1163985 Eucalyptus grandis
Eucgr.C00153 10.0kb downstream 10.0kb downstream 14752 true Chr03: 1139234-1153985 Eucalyptus grandis
Eucgr.C00153 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1139234-1149233 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065967 5270 Rosid View MSA
123745771 5271 Pentapetalae View MSA
122786516 5272 Eudicot View MSA
122043605 5273 Angiosperm View MSA
121344783 5274 Embryophyte View MSA
123426997 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.9041 0.0 151.655 High  
cufflinks 57.5849 0.0 160.398 High High
cufflinks 33.5297 0.0 88.3278 High Low
cufflinks 53.1028 0.0 146.328 High  
cufflinks 33.0697 0.0 82.631   Low
cufflinks 37.5761 0.0 95.2807 High  

0 Strain