Gene : Eucgr.C00150 E. grandis v2.0
Defline:  (1 of 5) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  89
Name:  ? Eucgr.C00150 Secondary Identifier:  ? PAC:32040186
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00150 0.5kb upstream 0.5kb upstream 1854 true Chr03: 1121425-1123278 Eucalyptus grandis
Eucgr.C00150 0.5kb upstream 0.5kb upstream 500 false Chr03: 1122779-1123278 Eucalyptus grandis
Eucgr.C00150 0.5kb downstream 0.5kb downstream 1854 true Chr03: 1120925-1122778 Eucalyptus grandis
Eucgr.C00150 0.5kb downstream 0.5kb downstream 500 false Chr03: 1120925-1121424 Eucalyptus grandis
Eucgr.C00150 1.0kb upstream 1.0kb upstream 2354 true Chr03: 1121425-1123778 Eucalyptus grandis
Eucgr.C00150 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1122779-1123778 Eucalyptus grandis
Eucgr.C00150 1.0kb downstream 1.0kb downstream 2354 true Chr03: 1120425-1122778 Eucalyptus grandis
Eucgr.C00150 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1120425-1121424 Eucalyptus grandis
Eucgr.C00150 2.0kb upstream 2.0kb upstream 3354 true Chr03: 1121425-1124778 Eucalyptus grandis
Eucgr.C00150 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1122779-1124778 Eucalyptus grandis
Eucgr.C00150 2.0kb downstream 2.0kb downstream 3354 true Chr03: 1119425-1122778 Eucalyptus grandis
Eucgr.C00150 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1119425-1121424 Eucalyptus grandis
Eucgr.C00150 5.0kb upstream 5.0kb upstream 6354 true Chr03: 1121425-1127778 Eucalyptus grandis
Eucgr.C00150 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1122779-1127778 Eucalyptus grandis
Eucgr.C00150 5.0kb downstream 5.0kb downstream 6354 true Chr03: 1116425-1122778 Eucalyptus grandis
Eucgr.C00150 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1116425-1121424 Eucalyptus grandis
Eucgr.C00150 10.0kb upstream 10.0kb upstream 11354 true Chr03: 1121425-1132778 Eucalyptus grandis
Eucgr.C00150 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1122779-1132778 Eucalyptus grandis
Eucgr.C00150 10.0kb downstream 10.0kb downstream 11354 true Chr03: 1111425-1122778 Eucalyptus grandis
Eucgr.C00150 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1111425-1121424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070505 5270 Rosid View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6537 0.0 30.8523   Low
cufflinks 45.7528 0.0 101.832 High  
cufflinks 28.3993 0.0 64.7648 High  
cufflinks 35.6291 0.0 80.2475    
cufflinks 56.6807 0.0 125.606 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain