Gene : Eucgr.C00147 E. grandis v2.0
Defline:  (1 of 27) PTHR11802:SF29 - SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED Genomic Order:  86
Name:  ? Eucgr.C00147 Secondary Identifier:  ? PAC:32037837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00147 0.5kb upstream 0.5kb upstream 4819 true Chr03: 1097707-1102525 Eucalyptus grandis
Eucgr.C00147 0.5kb upstream 0.5kb upstream 500 false Chr03: 1097707-1098206 Eucalyptus grandis
Eucgr.C00147 0.5kb downstream 0.5kb downstream 4819 true Chr03: 1098207-1103025 Eucalyptus grandis
Eucgr.C00147 0.5kb downstream 0.5kb downstream 500 false Chr03: 1102526-1103025 Eucalyptus grandis
Eucgr.C00147 1.0kb upstream 1.0kb upstream 5319 true Chr03: 1097207-1102525 Eucalyptus grandis
Eucgr.C00147 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1097207-1098206 Eucalyptus grandis
Eucgr.C00147 1.0kb downstream 1.0kb downstream 5319 true Chr03: 1098207-1103525 Eucalyptus grandis
Eucgr.C00147 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1102526-1103525 Eucalyptus grandis
Eucgr.C00147 2.0kb upstream 2.0kb upstream 6319 true Chr03: 1096207-1102525 Eucalyptus grandis
Eucgr.C00147 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1096207-1098206 Eucalyptus grandis
Eucgr.C00147 2.0kb downstream 2.0kb downstream 6319 true Chr03: 1098207-1104525 Eucalyptus grandis
Eucgr.C00147 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1102526-1104525 Eucalyptus grandis
Eucgr.C00147 5.0kb upstream 5.0kb upstream 9319 true Chr03: 1093207-1102525 Eucalyptus grandis
Eucgr.C00147 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1093207-1098206 Eucalyptus grandis
Eucgr.C00147 5.0kb downstream 5.0kb downstream 9319 true Chr03: 1098207-1107525 Eucalyptus grandis
Eucgr.C00147 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1102526-1107525 Eucalyptus grandis
Eucgr.C00147 10.0kb upstream 10.0kb upstream 14319 true Chr03: 1088207-1102525 Eucalyptus grandis
Eucgr.C00147 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1088207-1098206 Eucalyptus grandis
Eucgr.C00147 10.0kb downstream 10.0kb downstream 14319 true Chr03: 1098207-1112525 Eucalyptus grandis
Eucgr.C00147 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1102526-1112525 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072597 5270 Rosid View MSA
123628166 5271 Pentapetalae View MSA
122662461 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.046 0.0 65.1253 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 36.3565 0.0 82.4776 High High
cufflinks 1.06346 0.0 3.36729    
cufflinks 0.538685 0.0 1.92521 Low  
cufflinks 0.414872 0.0 1.54235 Low  

0 Strain