Gene : Eucgr.C00942 E. grandis v2.0
Defline:  (1 of 3) PTHR22761//PTHR22761:SF16 - SNF7 - RELATED Genomic Order:  777
Name:  ? Eucgr.C00942 Secondary Identifier:  ? PAC:32036806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00942 0.5kb upstream 0.5kb upstream 5843 true Chr03: 14847067-14852909 Eucalyptus grandis
Eucgr.C00942 0.5kb upstream 0.5kb upstream 500 false Chr03: 14847067-14847566 Eucalyptus grandis
Eucgr.C00942 0.5kb downstream 0.5kb downstream 5843 true Chr03: 14847567-14853409 Eucalyptus grandis
Eucgr.C00942 0.5kb downstream 0.5kb downstream 500 false Chr03: 14852910-14853409 Eucalyptus grandis
Eucgr.C00942 1.0kb upstream 1.0kb upstream 6343 true Chr03: 14846567-14852909 Eucalyptus grandis
Eucgr.C00942 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14846567-14847566 Eucalyptus grandis
Eucgr.C00942 1.0kb downstream 1.0kb downstream 6343 true Chr03: 14847567-14853909 Eucalyptus grandis
Eucgr.C00942 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14852910-14853909 Eucalyptus grandis
Eucgr.C00942 2.0kb upstream 2.0kb upstream 7343 true Chr03: 14845567-14852909 Eucalyptus grandis
Eucgr.C00942 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14845567-14847566 Eucalyptus grandis
Eucgr.C00942 2.0kb downstream 2.0kb downstream 7343 true Chr03: 14847567-14854909 Eucalyptus grandis
Eucgr.C00942 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14852910-14854909 Eucalyptus grandis
Eucgr.C00942 5.0kb upstream 5.0kb upstream 10343 true Chr03: 14842567-14852909 Eucalyptus grandis
Eucgr.C00942 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14842567-14847566 Eucalyptus grandis
Eucgr.C00942 5.0kb downstream 5.0kb downstream 10343 true Chr03: 14847567-14857909 Eucalyptus grandis
Eucgr.C00942 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14852910-14857909 Eucalyptus grandis
Eucgr.C00942 10.0kb upstream 10.0kb upstream 15343 true Chr03: 14837567-14852909 Eucalyptus grandis
Eucgr.C00942 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14837567-14847566 Eucalyptus grandis
Eucgr.C00942 10.0kb downstream 10.0kb downstream 15343 true Chr03: 14847567-14862909 Eucalyptus grandis
Eucgr.C00942 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14852910-14862909 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052466 5270 Rosid View MSA
123751251 5271 Pentapetalae View MSA
122786571 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6365 0.0 31.5997    
cufflinks 2.27342 0.0 6.41907   Low
cufflinks 10.8075 0.0 30.4787    
cufflinks 2.1423 0.0 6.17495   Low
cufflinks 5.60121 0.0 15.7675    
cufflinks 16.1978 0.0 49.3733   High

0 Strain