Gene : Eucgr.C00934 E. grandis v2.0
Defline:  (1 of 6) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Genomic Order:  772
Name:  ? Eucgr.C00934 Secondary Identifier:  ? PAC:32037126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00934 0.5kb upstream 0.5kb upstream 4548 true Chr03: 14793923-14798470 Eucalyptus grandis
Eucgr.C00934 0.5kb upstream 0.5kb upstream 500 false Chr03: 14793923-14794422 Eucalyptus grandis
Eucgr.C00934 0.5kb downstream 0.5kb downstream 4548 true Chr03: 14794423-14798970 Eucalyptus grandis
Eucgr.C00934 0.5kb downstream 0.5kb downstream 500 false Chr03: 14798471-14798970 Eucalyptus grandis
Eucgr.C00934 1.0kb upstream 1.0kb upstream 5048 true Chr03: 14793423-14798470 Eucalyptus grandis
Eucgr.C00934 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14793423-14794422 Eucalyptus grandis
Eucgr.C00934 1.0kb downstream 1.0kb downstream 5048 true Chr03: 14794423-14799470 Eucalyptus grandis
Eucgr.C00934 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14798471-14799470 Eucalyptus grandis
Eucgr.C00934 2.0kb upstream 2.0kb upstream 6048 true Chr03: 14792423-14798470 Eucalyptus grandis
Eucgr.C00934 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14792423-14794422 Eucalyptus grandis
Eucgr.C00934 2.0kb downstream 2.0kb downstream 6048 true Chr03: 14794423-14800470 Eucalyptus grandis
Eucgr.C00934 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14798471-14800470 Eucalyptus grandis
Eucgr.C00934 5.0kb upstream 5.0kb upstream 9048 true Chr03: 14789423-14798470 Eucalyptus grandis
Eucgr.C00934 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14789423-14794422 Eucalyptus grandis
Eucgr.C00934 5.0kb downstream 5.0kb downstream 9048 true Chr03: 14794423-14803470 Eucalyptus grandis
Eucgr.C00934 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14798471-14803470 Eucalyptus grandis
Eucgr.C00934 10.0kb upstream 10.0kb upstream 14048 true Chr03: 14784423-14798470 Eucalyptus grandis
Eucgr.C00934 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14784423-14794422 Eucalyptus grandis
Eucgr.C00934 10.0kb downstream 10.0kb downstream 14048 true Chr03: 14794423-14808470 Eucalyptus grandis
Eucgr.C00934 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14798471-14808470 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071196 5270 Rosid View MSA
123751251 5271 Pentapetalae View MSA
122786571 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.3431 0.0 108.043 High  
cufflinks 86.702 0.0 239.801 High  
cufflinks 38.259 0.0 88.039 High Low
cufflinks 101.712 0.0 240.695 High High
cufflinks 69.5496 0.0 159.262 High  
cufflinks 68.7778 0.0 156.599 High  

0 Strain