Gene : Eucgr.C00913 E. grandis v2.0
Defline:  (1 of 1) PTHR35133:SF1 - EFFECTOR OF TRANSCRIPTION2-RELATED Genomic Order:  755
Name:  ? Eucgr.C00913 Secondary Identifier:  ? PAC:32038926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00913 0.5kb upstream 0.5kb upstream 3715 true Chr03: 14573309-14577023 Eucalyptus grandis
Eucgr.C00913 0.5kb upstream 0.5kb upstream 500 false Chr03: 14573309-14573808 Eucalyptus grandis
Eucgr.C00913 0.5kb downstream 0.5kb downstream 3715 true Chr03: 14573809-14577523 Eucalyptus grandis
Eucgr.C00913 0.5kb downstream 0.5kb downstream 500 false Chr03: 14577024-14577523 Eucalyptus grandis
Eucgr.C00913 1.0kb upstream 1.0kb upstream 4215 true Chr03: 14572809-14577023 Eucalyptus grandis
Eucgr.C00913 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14572809-14573808 Eucalyptus grandis
Eucgr.C00913 1.0kb downstream 1.0kb downstream 4215 true Chr03: 14573809-14578023 Eucalyptus grandis
Eucgr.C00913 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14577024-14578023 Eucalyptus grandis
Eucgr.C00913 2.0kb upstream 2.0kb upstream 5215 true Chr03: 14571809-14577023 Eucalyptus grandis
Eucgr.C00913 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14571809-14573808 Eucalyptus grandis
Eucgr.C00913 2.0kb downstream 2.0kb downstream 5215 true Chr03: 14573809-14579023 Eucalyptus grandis
Eucgr.C00913 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14577024-14579023 Eucalyptus grandis
Eucgr.C00913 5.0kb upstream 5.0kb upstream 8215 true Chr03: 14568809-14577023 Eucalyptus grandis
Eucgr.C00913 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14568809-14573808 Eucalyptus grandis
Eucgr.C00913 5.0kb downstream 5.0kb downstream 8215 true Chr03: 14573809-14582023 Eucalyptus grandis
Eucgr.C00913 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14577024-14582023 Eucalyptus grandis
Eucgr.C00913 10.0kb upstream 10.0kb upstream 13215 true Chr03: 14563809-14577023 Eucalyptus grandis
Eucgr.C00913 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14563809-14573808 Eucalyptus grandis
Eucgr.C00913 10.0kb downstream 10.0kb downstream 13215 true Chr03: 14573809-14587023 Eucalyptus grandis
Eucgr.C00913 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14577024-14587023 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071545 5270 Rosid View MSA
123741281 5271 Pentapetalae View MSA
122790737 5272 Eudicot View MSA
122049539 5273 Angiosperm View MSA
121347892 5274 Embryophyte View MSA
123380668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.171 0.0 14.2644   High
cufflinks 2.486 0.0 6.24437    
cufflinks 4.2262 0.0 10.0787    
cufflinks 1.81338 0.0 4.69518   Low
cufflinks 3.71561 0.0 8.95496    
cufflinks 2.64757 0.0 6.64473    

0 Strain