Gene : Eucgr.C00885 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  730
Name:  ? Eucgr.C00885 Secondary Identifier:  ? PAC:32038999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00885 0.5kb upstream 0.5kb upstream 3391 true Chr03: 14245734-14249124 Eucalyptus grandis
Eucgr.C00885 0.5kb upstream 0.5kb upstream 500 false Chr03: 14245734-14246233 Eucalyptus grandis
Eucgr.C00885 0.5kb downstream 0.5kb downstream 3391 true Chr03: 14246234-14249624 Eucalyptus grandis
Eucgr.C00885 0.5kb downstream 0.5kb downstream 500 false Chr03: 14249125-14249624 Eucalyptus grandis
Eucgr.C00885 1.0kb upstream 1.0kb upstream 3891 true Chr03: 14245234-14249124 Eucalyptus grandis
Eucgr.C00885 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14245234-14246233 Eucalyptus grandis
Eucgr.C00885 1.0kb downstream 1.0kb downstream 3891 true Chr03: 14246234-14250124 Eucalyptus grandis
Eucgr.C00885 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14249125-14250124 Eucalyptus grandis
Eucgr.C00885 2.0kb upstream 2.0kb upstream 4891 true Chr03: 14244234-14249124 Eucalyptus grandis
Eucgr.C00885 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14244234-14246233 Eucalyptus grandis
Eucgr.C00885 2.0kb downstream 2.0kb downstream 4891 true Chr03: 14246234-14251124 Eucalyptus grandis
Eucgr.C00885 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14249125-14251124 Eucalyptus grandis
Eucgr.C00885 5.0kb upstream 5.0kb upstream 7891 true Chr03: 14241234-14249124 Eucalyptus grandis
Eucgr.C00885 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14241234-14246233 Eucalyptus grandis
Eucgr.C00885 5.0kb downstream 5.0kb downstream 7891 true Chr03: 14246234-14254124 Eucalyptus grandis
Eucgr.C00885 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14249125-14254124 Eucalyptus grandis
Eucgr.C00885 10.0kb upstream 10.0kb upstream 12891 true Chr03: 14236234-14249124 Eucalyptus grandis
Eucgr.C00885 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14236234-14246233 Eucalyptus grandis
Eucgr.C00885 10.0kb downstream 10.0kb downstream 12891 true Chr03: 14246234-14259124 Eucalyptus grandis
Eucgr.C00885 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14249125-14259124 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
124060726 5270 Rosid View MSA
123739079 5271 Pentapetalae View MSA
122791557 5272 Eudicot View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.341914 0.0 1.08611 Low  
cufflinks 0.0144653 0.0 0.104364 Low Low
cufflinks 0.430406 0.0 1.32029    
cufflinks 0.517687 0.0 1.54191    
cufflinks 0.0692165 0.0 0.270747 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain