Gene : Eucgr.C00872 E. grandis v2.0
Defline:  (1 of 3) PTHR24198:SF66 - REGULATORY PROTEIN NPR1-RELATED Genomic Order:  720
Name:  ? Eucgr.C00872 Secondary Identifier:  ? PAC:32039914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00872 0.5kb upstream 0.5kb upstream 4761 true Chr03: 14109087-14113847 Eucalyptus grandis
Eucgr.C00872 0.5kb upstream 0.5kb upstream 500 false Chr03: 14109087-14109586 Eucalyptus grandis
Eucgr.C00872 0.5kb downstream 0.5kb downstream 4761 true Chr03: 14109587-14114347 Eucalyptus grandis
Eucgr.C00872 0.5kb downstream 0.5kb downstream 500 false Chr03: 14113848-14114347 Eucalyptus grandis
Eucgr.C00872 1.0kb upstream 1.0kb upstream 5261 true Chr03: 14108587-14113847 Eucalyptus grandis
Eucgr.C00872 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14108587-14109586 Eucalyptus grandis
Eucgr.C00872 1.0kb downstream 1.0kb downstream 5261 true Chr03: 14109587-14114847 Eucalyptus grandis
Eucgr.C00872 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14113848-14114847 Eucalyptus grandis
Eucgr.C00872 2.0kb upstream 2.0kb upstream 6261 true Chr03: 14107587-14113847 Eucalyptus grandis
Eucgr.C00872 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14107587-14109586 Eucalyptus grandis
Eucgr.C00872 2.0kb downstream 2.0kb downstream 6261 true Chr03: 14109587-14115847 Eucalyptus grandis
Eucgr.C00872 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14113848-14115847 Eucalyptus grandis
Eucgr.C00872 5.0kb upstream 5.0kb upstream 9261 true Chr03: 14104587-14113847 Eucalyptus grandis
Eucgr.C00872 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14104587-14109586 Eucalyptus grandis
Eucgr.C00872 5.0kb downstream 5.0kb downstream 9261 true Chr03: 14109587-14118847 Eucalyptus grandis
Eucgr.C00872 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14113848-14118847 Eucalyptus grandis
Eucgr.C00872 10.0kb upstream 10.0kb upstream 14261 true Chr03: 14099587-14113847 Eucalyptus grandis
Eucgr.C00872 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14099587-14109586 Eucalyptus grandis
Eucgr.C00872 10.0kb downstream 10.0kb downstream 14261 true Chr03: 14109587-14123847 Eucalyptus grandis
Eucgr.C00872 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14113848-14123847 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061593 5270 Rosid View MSA
123747921 5271 Pentapetalae View MSA
122786106 5272 Eudicot View MSA
122045658 5273 Angiosperm View MSA
121344043 5274 Embryophyte View MSA
123379964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4544 0.0 77.5189 High  
cufflinks 65.356 0.0 170.706 High  
cufflinks 45.2294 0.0 112.735 High  
cufflinks 79.2009 0.0 211.786 High  
cufflinks 78.3852 0.0 208.329 High  
cufflinks 25.4371 0.0 57.2928   Low

0 Strain