Gene : Eucgr.C00847 E. grandis v2.0
Defline:  (1 of 1) PTHR13100:SF10 - CELL GROWTH-REGULATING NUCLEOLAR PROTEIN Genomic Order:  698
Name:  ? Eucgr.C00847 Secondary Identifier:  ? PAC:32037267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00847 0.5kb upstream 0.5kb upstream 3156 true Chr03: 13916840-13919995 Eucalyptus grandis
Eucgr.C00847 0.5kb upstream 0.5kb upstream 500 false Chr03: 13916840-13917339 Eucalyptus grandis
Eucgr.C00847 0.5kb downstream 0.5kb downstream 3156 true Chr03: 13917340-13920495 Eucalyptus grandis
Eucgr.C00847 0.5kb downstream 0.5kb downstream 500 false Chr03: 13919996-13920495 Eucalyptus grandis
Eucgr.C00847 1.0kb upstream 1.0kb upstream 3656 true Chr03: 13916340-13919995 Eucalyptus grandis
Eucgr.C00847 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13916340-13917339 Eucalyptus grandis
Eucgr.C00847 1.0kb downstream 1.0kb downstream 3656 true Chr03: 13917340-13920995 Eucalyptus grandis
Eucgr.C00847 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13919996-13920995 Eucalyptus grandis
Eucgr.C00847 2.0kb upstream 2.0kb upstream 4656 true Chr03: 13915340-13919995 Eucalyptus grandis
Eucgr.C00847 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13915340-13917339 Eucalyptus grandis
Eucgr.C00847 2.0kb downstream 2.0kb downstream 4656 true Chr03: 13917340-13921995 Eucalyptus grandis
Eucgr.C00847 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13919996-13921995 Eucalyptus grandis
Eucgr.C00847 5.0kb upstream 5.0kb upstream 7656 true Chr03: 13912340-13919995 Eucalyptus grandis
Eucgr.C00847 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13912340-13917339 Eucalyptus grandis
Eucgr.C00847 5.0kb downstream 5.0kb downstream 7656 true Chr03: 13917340-13924995 Eucalyptus grandis
Eucgr.C00847 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13919996-13924995 Eucalyptus grandis
Eucgr.C00847 10.0kb upstream 10.0kb upstream 12656 true Chr03: 13907340-13919995 Eucalyptus grandis
Eucgr.C00847 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13907340-13917339 Eucalyptus grandis
Eucgr.C00847 10.0kb downstream 10.0kb downstream 12656 true Chr03: 13917340-13929995 Eucalyptus grandis
Eucgr.C00847 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13919996-13929995 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066712 5270 Rosid View MSA
123737699 5271 Pentapetalae View MSA
122788862 5272 Eudicot View MSA
122047335 5273 Angiosperm View MSA
121345272 5274 Embryophyte View MSA
123427954 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7469 0.0 26.7559    
cufflinks 21.6793 0.0 48.08    
cufflinks 22.5333 0.0 49.9475    
cufflinks 43.2884 0.0 96.2244 High  
cufflinks 81.8561 0.0 187.02 High High
cufflinks 8.37961 0.0 19.662   Low

0 Strain