Gene : Eucgr.C00830 E. grandis v2.0
Defline:  (1 of 3) PTHR11760//PTHR11760:SF22 - 30S/40S RIBOSOMAL PROTEIN S3 Genomic Order:  684
Name:  ? Eucgr.C00830 Secondary Identifier:  ? PAC:32036730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00830 0.5kb upstream 0.5kb upstream 4064 true Chr03: 13775620-13779683 Eucalyptus grandis
Eucgr.C00830 0.5kb upstream 0.5kb upstream 500 false Chr03: 13775620-13776119 Eucalyptus grandis
Eucgr.C00830 0.5kb downstream 0.5kb downstream 4064 true Chr03: 13776120-13780183 Eucalyptus grandis
Eucgr.C00830 0.5kb downstream 0.5kb downstream 500 false Chr03: 13779684-13780183 Eucalyptus grandis
Eucgr.C00830 1.0kb upstream 1.0kb upstream 4564 true Chr03: 13775120-13779683 Eucalyptus grandis
Eucgr.C00830 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13775120-13776119 Eucalyptus grandis
Eucgr.C00830 1.0kb downstream 1.0kb downstream 4564 true Chr03: 13776120-13780683 Eucalyptus grandis
Eucgr.C00830 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13779684-13780683 Eucalyptus grandis
Eucgr.C00830 2.0kb upstream 2.0kb upstream 5564 true Chr03: 13774120-13779683 Eucalyptus grandis
Eucgr.C00830 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13774120-13776119 Eucalyptus grandis
Eucgr.C00830 2.0kb downstream 2.0kb downstream 5564 true Chr03: 13776120-13781683 Eucalyptus grandis
Eucgr.C00830 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13779684-13781683 Eucalyptus grandis
Eucgr.C00830 5.0kb upstream 5.0kb upstream 8564 true Chr03: 13771120-13779683 Eucalyptus grandis
Eucgr.C00830 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13771120-13776119 Eucalyptus grandis
Eucgr.C00830 5.0kb downstream 5.0kb downstream 8564 true Chr03: 13776120-13784683 Eucalyptus grandis
Eucgr.C00830 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13779684-13784683 Eucalyptus grandis
Eucgr.C00830 10.0kb upstream 10.0kb upstream 13564 true Chr03: 13766120-13779683 Eucalyptus grandis
Eucgr.C00830 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13766120-13776119 Eucalyptus grandis
Eucgr.C00830 10.0kb downstream 10.0kb downstream 13564 true Chr03: 13776120-13789683 Eucalyptus grandis
Eucgr.C00830 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13779684-13789683 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.716 0.0 291.491 High  
cufflinks 63.8881 0.0 145.455 High Low
cufflinks 108.373 0.0 279.494 High  
cufflinks 96.4513 0.0 246.29 High  
cufflinks 100.284 0.0 235.999 High  
cufflinks 92.338 0.0 215.706 High  

0 Strain