Gene : Eucgr.C00757 E. grandis v2.0
Defline:  (1 of 10) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  615
Name:  ? Eucgr.C00757 Secondary Identifier:  ? PAC:32038540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00757 0.5kb upstream 0.5kb upstream 5395 true Chr03: 12849288-12854682 Eucalyptus grandis
Eucgr.C00757 0.5kb upstream 0.5kb upstream 500 false Chr03: 12854183-12854682 Eucalyptus grandis
Eucgr.C00757 0.5kb downstream 0.5kb downstream 5395 true Chr03: 12848788-12854182 Eucalyptus grandis
Eucgr.C00757 0.5kb downstream 0.5kb downstream 500 false Chr03: 12848788-12849287 Eucalyptus grandis
Eucgr.C00757 1.0kb upstream 1.0kb upstream 5895 true Chr03: 12849288-12855182 Eucalyptus grandis
Eucgr.C00757 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12854183-12855182 Eucalyptus grandis
Eucgr.C00757 1.0kb downstream 1.0kb downstream 5895 true Chr03: 12848288-12854182 Eucalyptus grandis
Eucgr.C00757 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12848288-12849287 Eucalyptus grandis
Eucgr.C00757 2.0kb upstream 2.0kb upstream 6895 true Chr03: 12849288-12856182 Eucalyptus grandis
Eucgr.C00757 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12854183-12856182 Eucalyptus grandis
Eucgr.C00757 2.0kb downstream 2.0kb downstream 6895 true Chr03: 12847288-12854182 Eucalyptus grandis
Eucgr.C00757 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12847288-12849287 Eucalyptus grandis
Eucgr.C00757 5.0kb upstream 5.0kb upstream 9895 true Chr03: 12849288-12859182 Eucalyptus grandis
Eucgr.C00757 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12854183-12859182 Eucalyptus grandis
Eucgr.C00757 5.0kb downstream 5.0kb downstream 9895 true Chr03: 12844288-12854182 Eucalyptus grandis
Eucgr.C00757 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12844288-12849287 Eucalyptus grandis
Eucgr.C00757 10.0kb upstream 10.0kb upstream 14895 true Chr03: 12849288-12864182 Eucalyptus grandis
Eucgr.C00757 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12854183-12864182 Eucalyptus grandis
Eucgr.C00757 10.0kb downstream 10.0kb downstream 14895 true Chr03: 12839288-12854182 Eucalyptus grandis
Eucgr.C00757 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12839288-12849287 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071956 5270 Rosid View MSA
123741480 5271 Pentapetalae View MSA
122796388 5272 Eudicot View MSA
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30247 0.0 3.55997    
cufflinks 2.331 0.0 5.9892    
cufflinks 2.77049 0.0 7.0229    
cufflinks 1.9036 0.0 4.99291    
cufflinks 3.13607 0.0 7.85482    
cufflinks 0.637578 0.0 1.88505 Low Low

0 Strain