Gene : Eucgr.C00772 E. grandis v2.0
Defline:  (1 of 1) PTHR23426//PTHR23426:SF31 - FERREDOXIN/ADRENODOXIN Genomic Order:  629
Name:  ? Eucgr.C00772 Secondary Identifier:  ? PAC:32038375
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1507 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00772 0.5kb upstream 0.5kb upstream 3972 true Chr03: 13040820-13044791 Eucalyptus grandis
Eucgr.C00772 0.5kb upstream 0.5kb upstream 500 false Chr03: 13040820-13041319 Eucalyptus grandis
Eucgr.C00772 0.5kb downstream 0.5kb downstream 3972 true Chr03: 13041320-13045291 Eucalyptus grandis
Eucgr.C00772 0.5kb downstream 0.5kb downstream 500 false Chr03: 13044792-13045291 Eucalyptus grandis
Eucgr.C00772 1.0kb upstream 1.0kb upstream 4472 true Chr03: 13040320-13044791 Eucalyptus grandis
Eucgr.C00772 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13040320-13041319 Eucalyptus grandis
Eucgr.C00772 1.0kb downstream 1.0kb downstream 4472 true Chr03: 13041320-13045791 Eucalyptus grandis
Eucgr.C00772 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13044792-13045791 Eucalyptus grandis
Eucgr.C00772 2.0kb upstream 2.0kb upstream 5472 true Chr03: 13039320-13044791 Eucalyptus grandis
Eucgr.C00772 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13039320-13041319 Eucalyptus grandis
Eucgr.C00772 2.0kb downstream 2.0kb downstream 5472 true Chr03: 13041320-13046791 Eucalyptus grandis
Eucgr.C00772 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13044792-13046791 Eucalyptus grandis
Eucgr.C00772 5.0kb upstream 5.0kb upstream 8472 true Chr03: 13036320-13044791 Eucalyptus grandis
Eucgr.C00772 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13036320-13041319 Eucalyptus grandis
Eucgr.C00772 5.0kb downstream 5.0kb downstream 8472 true Chr03: 13041320-13049791 Eucalyptus grandis
Eucgr.C00772 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13044792-13049791 Eucalyptus grandis
Eucgr.C00772 10.0kb upstream 10.0kb upstream 13472 true Chr03: 13031320-13044791 Eucalyptus grandis
Eucgr.C00772 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13031320-13041319 Eucalyptus grandis
Eucgr.C00772 10.0kb downstream 10.0kb downstream 13472 true Chr03: 13041320-13054791 Eucalyptus grandis
Eucgr.C00772 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13044792-13054791 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067802 5270 Rosid View MSA
123747158 5271 Pentapetalae View MSA
122792160 5272 Eudicot View MSA
122043528 5273 Angiosperm View MSA
121349592 5274 Embryophyte View MSA
123425610 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34644 0.0 16.7426    
cufflinks 2.09636 0.0 6.20365   Low
cufflinks 6.42582 0.0 16.9535    
cufflinks 3.2904 0.0 9.29169    
cufflinks 9.35664 0.0 23.7803   High
cufflinks 5.29095 0.0 14.2198    

0 Strain