Gene : Eucgr.C00731 E. grandis v2.0
Defline:  (1 of 6) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  593
Name:  ? Eucgr.C00731 Secondary Identifier:  ? PAC:32039501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00731 0.5kb upstream 0.5kb upstream 9107 true Chr03: 12626748-12635854 Eucalyptus grandis
Eucgr.C00731 0.5kb upstream 0.5kb upstream 500 false Chr03: 12626748-12627247 Eucalyptus grandis
Eucgr.C00731 0.5kb downstream 0.5kb downstream 9107 true Chr03: 12627248-12636354 Eucalyptus grandis
Eucgr.C00731 0.5kb downstream 0.5kb downstream 500 false Chr03: 12635855-12636354 Eucalyptus grandis
Eucgr.C00731 1.0kb upstream 1.0kb upstream 9607 true Chr03: 12626248-12635854 Eucalyptus grandis
Eucgr.C00731 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12626248-12627247 Eucalyptus grandis
Eucgr.C00731 1.0kb downstream 1.0kb downstream 9607 true Chr03: 12627248-12636854 Eucalyptus grandis
Eucgr.C00731 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12635855-12636854 Eucalyptus grandis
Eucgr.C00731 2.0kb upstream 2.0kb upstream 10607 true Chr03: 12625248-12635854 Eucalyptus grandis
Eucgr.C00731 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12625248-12627247 Eucalyptus grandis
Eucgr.C00731 2.0kb downstream 2.0kb downstream 10607 true Chr03: 12627248-12637854 Eucalyptus grandis
Eucgr.C00731 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12635855-12637854 Eucalyptus grandis
Eucgr.C00731 5.0kb upstream 5.0kb upstream 13607 true Chr03: 12622248-12635854 Eucalyptus grandis
Eucgr.C00731 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12622248-12627247 Eucalyptus grandis
Eucgr.C00731 5.0kb downstream 5.0kb downstream 13607 true Chr03: 12627248-12640854 Eucalyptus grandis
Eucgr.C00731 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12635855-12640854 Eucalyptus grandis
Eucgr.C00731 10.0kb upstream 10.0kb upstream 18607 true Chr03: 12617248-12635854 Eucalyptus grandis
Eucgr.C00731 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12617248-12627247 Eucalyptus grandis
Eucgr.C00731 10.0kb downstream 10.0kb downstream 18607 true Chr03: 12627248-12645854 Eucalyptus grandis
Eucgr.C00731 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12635855-12645854 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065227 5270 Rosid View MSA
123737112 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.2292 0.0 58.2107    
cufflinks 10.4866 0.0 23.4195    
cufflinks 26.5145 0.0 58.8594 High  
cufflinks 34.8004 0.0 77.9612    
cufflinks 7.40475 0.0 16.827   Low
cufflinks 27.6717 0.0 61.4789    

0 Strain