Gene : Eucgr.C00676 E. grandis v2.0
Defline:  (1 of 1) PTHR22807:SF4 - NOL1/NOP2/SUN DOMAIN FAMILY MEMBER 5B-RELATED Genomic Order:  550
Name:  ? Eucgr.C00676 Secondary Identifier:  ? PAC:32037410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00676 0.5kb upstream 0.5kb upstream 6607 true Chr03: 12096512-12103118 Eucalyptus grandis
Eucgr.C00676 0.5kb upstream 0.5kb upstream 500 false Chr03: 12096512-12097011 Eucalyptus grandis
Eucgr.C00676 0.5kb downstream 0.5kb downstream 6607 true Chr03: 12097012-12103618 Eucalyptus grandis
Eucgr.C00676 0.5kb downstream 0.5kb downstream 500 false Chr03: 12103119-12103618 Eucalyptus grandis
Eucgr.C00676 1.0kb upstream 1.0kb upstream 7107 true Chr03: 12096012-12103118 Eucalyptus grandis
Eucgr.C00676 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12096012-12097011 Eucalyptus grandis
Eucgr.C00676 1.0kb downstream 1.0kb downstream 7107 true Chr03: 12097012-12104118 Eucalyptus grandis
Eucgr.C00676 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12103119-12104118 Eucalyptus grandis
Eucgr.C00676 2.0kb upstream 2.0kb upstream 8107 true Chr03: 12095012-12103118 Eucalyptus grandis
Eucgr.C00676 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12095012-12097011 Eucalyptus grandis
Eucgr.C00676 2.0kb downstream 2.0kb downstream 8107 true Chr03: 12097012-12105118 Eucalyptus grandis
Eucgr.C00676 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12103119-12105118 Eucalyptus grandis
Eucgr.C00676 5.0kb upstream 5.0kb upstream 11107 true Chr03: 12092012-12103118 Eucalyptus grandis
Eucgr.C00676 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12092012-12097011 Eucalyptus grandis
Eucgr.C00676 5.0kb downstream 5.0kb downstream 11107 true Chr03: 12097012-12108118 Eucalyptus grandis
Eucgr.C00676 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12103119-12108118 Eucalyptus grandis
Eucgr.C00676 10.0kb upstream 10.0kb upstream 16107 true Chr03: 12087012-12103118 Eucalyptus grandis
Eucgr.C00676 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12087012-12097011 Eucalyptus grandis
Eucgr.C00676 10.0kb downstream 10.0kb downstream 16107 true Chr03: 12097012-12113118 Eucalyptus grandis
Eucgr.C00676 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12103119-12113118 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061219 5270 Rosid View MSA
123738087 5271 Pentapetalae View MSA
122791189 5272 Eudicot View MSA
122043756 5273 Angiosperm View MSA
121346877 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.62132 0.0 14.5939    
cufflinks 2.72059 0.0 7.60757    
cufflinks 5.08148 0.0 13.0373    
cufflinks 2.56521 0.0 7.16898    
cufflinks 2.62618 0.0 7.39314    
cufflinks 11.2944 0.0 26.4274   High

0 Strain