Gene : Eucgr.C00663 E. grandis v2.0
Defline:  (1 of 2) PTHR10168:SF56 - GLUTAREDOXIN-C10-RELATED Genomic Order:  537
Name:  ? Eucgr.C00663 Secondary Identifier:  ? PAC:32037291
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00663 0.5kb upstream 0.5kb upstream 1056 true Chr03: 11975109-11976164 Eucalyptus grandis
Eucgr.C00663 0.5kb upstream 0.5kb upstream 500 false Chr03: 11975665-11976164 Eucalyptus grandis
Eucgr.C00663 0.5kb downstream 0.5kb downstream 1056 true Chr03: 11974609-11975664 Eucalyptus grandis
Eucgr.C00663 0.5kb downstream 0.5kb downstream 500 false Chr03: 11974609-11975108 Eucalyptus grandis
Eucgr.C00663 1.0kb upstream 1.0kb upstream 1556 true Chr03: 11975109-11976664 Eucalyptus grandis
Eucgr.C00663 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11975665-11976664 Eucalyptus grandis
Eucgr.C00663 1.0kb downstream 1.0kb downstream 1556 true Chr03: 11974109-11975664 Eucalyptus grandis
Eucgr.C00663 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11974109-11975108 Eucalyptus grandis
Eucgr.C00663 2.0kb upstream 2.0kb upstream 2556 true Chr03: 11975109-11977664 Eucalyptus grandis
Eucgr.C00663 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11975665-11977664 Eucalyptus grandis
Eucgr.C00663 2.0kb downstream 2.0kb downstream 2556 true Chr03: 11973109-11975664 Eucalyptus grandis
Eucgr.C00663 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11973109-11975108 Eucalyptus grandis
Eucgr.C00663 5.0kb upstream 5.0kb upstream 5556 true Chr03: 11975109-11980664 Eucalyptus grandis
Eucgr.C00663 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11975665-11980664 Eucalyptus grandis
Eucgr.C00663 5.0kb downstream 5.0kb downstream 5556 true Chr03: 11970109-11975664 Eucalyptus grandis
Eucgr.C00663 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11970109-11975108 Eucalyptus grandis
Eucgr.C00663 10.0kb upstream 10.0kb upstream 10556 true Chr03: 11975109-11985664 Eucalyptus grandis
Eucgr.C00663 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11975665-11985664 Eucalyptus grandis
Eucgr.C00663 10.0kb downstream 10.0kb downstream 10556 true Chr03: 11965109-11975664 Eucalyptus grandis
Eucgr.C00663 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11965109-11975108 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064359 5270 Rosid View MSA
123737705 5271 Pentapetalae View MSA
122788634 5272 Eudicot View MSA
122046689 5273 Angiosperm View MSA
121310641 5274 Embryophyte View MSA
123348073 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1517 0.0 47.5678    
cufflinks 29.7822 0.0 74.8074   High
cufflinks 11.9549 0.0 33.0018    
cufflinks 17.0797 0.0 45.7247    
cufflinks 10.3853 0.0 29.01   Low
cufflinks 13.2266 0.0 35.5474    

0 Strain