Gene : Eucgr.C00657 E. grandis v2.0
Defline:  (1 of 1) PTHR12789 - DENSITY-REGULATED PROTEIN HOMOLOG Genomic Order:  531
Name:  ? Eucgr.C00657 Secondary Identifier:  ? PAC:32038929
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00657 0.5kb upstream 0.5kb upstream 4108 true Chr03: 11930424-11934531 Eucalyptus grandis
Eucgr.C00657 0.5kb upstream 0.5kb upstream 500 false Chr03: 11930424-11930923 Eucalyptus grandis
Eucgr.C00657 0.5kb downstream 0.5kb downstream 4108 true Chr03: 11930924-11935031 Eucalyptus grandis
Eucgr.C00657 0.5kb downstream 0.5kb downstream 500 false Chr03: 11934532-11935031 Eucalyptus grandis
Eucgr.C00657 1.0kb upstream 1.0kb upstream 4608 true Chr03: 11929924-11934531 Eucalyptus grandis
Eucgr.C00657 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11929924-11930923 Eucalyptus grandis
Eucgr.C00657 1.0kb downstream 1.0kb downstream 4608 true Chr03: 11930924-11935531 Eucalyptus grandis
Eucgr.C00657 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11934532-11935531 Eucalyptus grandis
Eucgr.C00657 2.0kb upstream 2.0kb upstream 5608 true Chr03: 11928924-11934531 Eucalyptus grandis
Eucgr.C00657 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11928924-11930923 Eucalyptus grandis
Eucgr.C00657 2.0kb downstream 2.0kb downstream 5608 true Chr03: 11930924-11936531 Eucalyptus grandis
Eucgr.C00657 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11934532-11936531 Eucalyptus grandis
Eucgr.C00657 5.0kb upstream 5.0kb upstream 8608 true Chr03: 11925924-11934531 Eucalyptus grandis
Eucgr.C00657 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11925924-11930923 Eucalyptus grandis
Eucgr.C00657 5.0kb downstream 5.0kb downstream 8608 true Chr03: 11930924-11939531 Eucalyptus grandis
Eucgr.C00657 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11934532-11939531 Eucalyptus grandis
Eucgr.C00657 10.0kb upstream 10.0kb upstream 13608 true Chr03: 11920924-11934531 Eucalyptus grandis
Eucgr.C00657 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11920924-11930923 Eucalyptus grandis
Eucgr.C00657 10.0kb downstream 10.0kb downstream 13608 true Chr03: 11930924-11944531 Eucalyptus grandis
Eucgr.C00657 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11934532-11944531 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070344 5270 Rosid View MSA
123750636 5271 Pentapetalae View MSA
122790029 5272 Eudicot View MSA
122051404 5273 Angiosperm View MSA
121346997 5274 Embryophyte View MSA
123423903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.497 0.0 56.6032   Low
cufflinks 37.3057 0.0 82.5119    
cufflinks 26.9044 0.0 59.6539 High Low
cufflinks 42.1612 0.0 93.3333 High  
cufflinks 43.5632 0.0 96.4495 High High
cufflinks 32.5651 0.0 72.0476    

0 Strain