Gene : Eucgr.C00638 E. grandis v2.0
Defline:  (1 of 1) PTHR11995:SF19 - NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL Genomic Order:  514
Name:  ? Eucgr.C00638 Secondary Identifier:  ? PAC:32036403
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00638 0.5kb upstream 0.5kb upstream 4359 true Chr03: 11786597-11790955 Eucalyptus grandis
Eucgr.C00638 0.5kb upstream 0.5kb upstream 500 false Chr03: 11790456-11790955 Eucalyptus grandis
Eucgr.C00638 0.5kb downstream 0.5kb downstream 4359 true Chr03: 11786097-11790455 Eucalyptus grandis
Eucgr.C00638 0.5kb downstream 0.5kb downstream 500 false Chr03: 11786097-11786596 Eucalyptus grandis
Eucgr.C00638 1.0kb upstream 1.0kb upstream 4859 true Chr03: 11786597-11791455 Eucalyptus grandis
Eucgr.C00638 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11790456-11791455 Eucalyptus grandis
Eucgr.C00638 1.0kb downstream 1.0kb downstream 4859 true Chr03: 11785597-11790455 Eucalyptus grandis
Eucgr.C00638 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11785597-11786596 Eucalyptus grandis
Eucgr.C00638 2.0kb upstream 2.0kb upstream 5859 true Chr03: 11786597-11792455 Eucalyptus grandis
Eucgr.C00638 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11790456-11792455 Eucalyptus grandis
Eucgr.C00638 2.0kb downstream 2.0kb downstream 5859 true Chr03: 11784597-11790455 Eucalyptus grandis
Eucgr.C00638 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11784597-11786596 Eucalyptus grandis
Eucgr.C00638 5.0kb upstream 5.0kb upstream 8859 true Chr03: 11786597-11795455 Eucalyptus grandis
Eucgr.C00638 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11790456-11795455 Eucalyptus grandis
Eucgr.C00638 5.0kb downstream 5.0kb downstream 8859 true Chr03: 11781597-11790455 Eucalyptus grandis
Eucgr.C00638 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11781597-11786596 Eucalyptus grandis
Eucgr.C00638 10.0kb upstream 10.0kb upstream 13859 true Chr03: 11786597-11800455 Eucalyptus grandis
Eucgr.C00638 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11790456-11800455 Eucalyptus grandis
Eucgr.C00638 10.0kb downstream 10.0kb downstream 13859 true Chr03: 11776597-11790455 Eucalyptus grandis
Eucgr.C00638 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11776597-11786596 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
124062804 5270 Rosid View MSA
123752382 5271 Pentapetalae View MSA
122791992 5272 Eudicot View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.2645 0.0 179.974 High  
cufflinks 81.9211 0.0 181.534 High  
cufflinks 63.8389 0.0 141.19 High  
cufflinks 94.3772 0.0 209.43 High High
cufflinks 53.001 0.0 117.392 High Low
cufflinks 64.3103 0.0 142.219 High  

0 Strain