Gene : Eucgr.C00646 E. grandis v2.0
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  522
Name:  ? Eucgr.C00646 Secondary Identifier:  ? PAC:32036296
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCLEAV-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00646 0.5kb upstream 0.5kb upstream 7067 true Chr03: 11857309-11864375 Eucalyptus grandis
Eucgr.C00646 0.5kb upstream 0.5kb upstream 500 false Chr03: 11863876-11864375 Eucalyptus grandis
Eucgr.C00646 0.5kb downstream 0.5kb downstream 7067 true Chr03: 11856809-11863875 Eucalyptus grandis
Eucgr.C00646 0.5kb downstream 0.5kb downstream 500 false Chr03: 11856809-11857308 Eucalyptus grandis
Eucgr.C00646 1.0kb upstream 1.0kb upstream 7567 true Chr03: 11857309-11864875 Eucalyptus grandis
Eucgr.C00646 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11863876-11864875 Eucalyptus grandis
Eucgr.C00646 1.0kb downstream 1.0kb downstream 7567 true Chr03: 11856309-11863875 Eucalyptus grandis
Eucgr.C00646 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11856309-11857308 Eucalyptus grandis
Eucgr.C00646 2.0kb upstream 2.0kb upstream 8567 true Chr03: 11857309-11865875 Eucalyptus grandis
Eucgr.C00646 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11863876-11865875 Eucalyptus grandis
Eucgr.C00646 2.0kb downstream 2.0kb downstream 8567 true Chr03: 11855309-11863875 Eucalyptus grandis
Eucgr.C00646 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11855309-11857308 Eucalyptus grandis
Eucgr.C00646 5.0kb upstream 5.0kb upstream 11567 true Chr03: 11857309-11868875 Eucalyptus grandis
Eucgr.C00646 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11863876-11868875 Eucalyptus grandis
Eucgr.C00646 5.0kb downstream 5.0kb downstream 11567 true Chr03: 11852309-11863875 Eucalyptus grandis
Eucgr.C00646 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11852309-11857308 Eucalyptus grandis
Eucgr.C00646 10.0kb upstream 10.0kb upstream 16567 true Chr03: 11857309-11873875 Eucalyptus grandis
Eucgr.C00646 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11863876-11873875 Eucalyptus grandis
Eucgr.C00646 10.0kb downstream 10.0kb downstream 16567 true Chr03: 11847309-11863875 Eucalyptus grandis
Eucgr.C00646 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11847309-11857308 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0108 0.0 62.9512 High  
cufflinks 200.269 0.0 555.598 High High
cufflinks 14.183 0.0 31.3683    
cufflinks 147.37 0.0 390.373 High High
cufflinks 9.8835 0.0 21.9107   Low
cufflinks 17.8302 0.0 39.5035    

0 Strain